Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heligmosomoides_20polygyrus_20bakeri_20[genbank_20GCA_5F900096555.1_
202016-09-19] 23,647 sequences; 696,954,138 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq153 86.0 5e-12
>seq153
Length=425603
Score = 86.0 bits (94), Expect = 5e-12
Identities = 154/225 (68%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 20952 CCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGG 21011
|| || |||| ||||||| ||||| ||||||| || || ||||||||||| | ||
Sbjct 197869 CCACGAAGCCGAAGCACCAGATGCAGTATGGACTCTTTCTGGATGTTATAGTCTGAAAGA 197928
Query 21012 GTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACG 21071
|| || | ||||| ||||||||| | ||| | || || | |||||||| || |
Sbjct 197929 GTGTGTCCATCCTCGAGCTGTTTGTCGGCAAAGATGAGACGTTGCTGGTCTGGTGGAATT 197988
Query 21072 CCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCC 21131
||||||||||| |||||| ||||| | ||| || ||| | | ||
Sbjct 197989 CCTTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTCTCAGATGCTTGAACCTCT 198048
Query 21132 ACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
| ||| | ||||| ||||| ||||| || || || || ||||||
Sbjct 198049 AGGGTGGTCGTCTTTCCGGTCAACGTCTTCACGAAGATCTGCATT 198093
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422137505822252
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |