Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heligmosomoides_20polygyrus_20bakeri_20[genbank_20GCA_5F900096555.1_
202016-09-19] 23,647 sequences; 696,954,138 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq1973 105 6e-18
>seq1973
Length=111955
Score = 105 bits (116), Expect = 6e-18
Identities = 120/161 (75%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 5621 ACCTCGAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCG 5680
||||| || || | | ||||||||||| |||| ||| || | || |||||||||
Sbjct 23693 ACCTCAAAGTCAGTCGGTCCGAAGTTGAAGAGCAGCACTTTCAGCTCTCCTCGGTAGTCG 23634
Query 5681 GCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGA 5740
|| | ||| || || || ||||||||||| | |||| ||||||| ||||| ||||||
Sbjct 23633 CTATCCACCACACCAGCACCGACGTCGATGAAATTCTTGGCCGCCAGACCGGAACGGGGA 23574
Query 5741 GCCACGCGGCCGTAGCACCCATCGGGAAGCTGTATCTGCAG 5781
||||| ||||| ||| | ||| ||||||| | ||||||
Sbjct 23573 GCCACTCGGCCATAGTAGCCAAACGGAAGCTCGACCTGCAG 23533
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429930459262664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |