Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heligmosomoides_20polygyrus_20bakeri_20[genbank_20GCA_5F900096555.1_
202016-09-19] 23,647 sequences; 696,954,138 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq2432 96.9 3e-15
>seq2432
Length=89687
Score = 96.9 bits (106), Expect = 3e-15
Identities = 117/157 (75%), Gaps = 2/157 (1%)
Strand=Plus/Plus
Query 126962 TCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCC 127021
|||| || || || || ||||||||||||||||||| ||||| || |||||||||| |
Sbjct 8072 TCTACATGCTTACCCGCAAAGATCAATCGCTGCTGATCTGGAGGAATTCCCTCCTTGT-C 8130
Query 127022 GTGATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGT 127080
||| | | || ||||| | ||||| |||||| | ||||||||| | ||| | ||
Sbjct 8131 TTGAATCTTTGCCTTGACGTTTTCGATGGTGTCTGAGGCCTCGACTTCCAGGGTGATTGT 8190
Query 127081 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117
|| || || || || || || || ||||||||| ||
Sbjct 8191 CTTTCCAGTGAGCGTCTTAACGAAGATCTGCATGCCT 8227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475360247907280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |