Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heligmosomoides_20polygyrus_20bakeri_20[genbank_20GCA_5F900096555.1_ 202016-09-19] 23,647 sequences; 696,954,138 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq2432 96.9 3e-15 >seq2432 Length=89687 Score = 96.9 bits (106), Expect = 3e-15 Identities = 117/157 (75%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 126962 TCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCC 127021 |||| || || || || ||||||||||||||||||| ||||| || |||||||||| | Sbjct 8072 TCTACATGCTTACCCGCAAAGATCAATCGCTGCTGATCTGGAGGAATTCCCTCCTTGT-C 8130 Query 127022 GTGATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGT 127080 ||| | | || ||||| | ||||| |||||| | ||||||||| | ||| | || Sbjct 8131 TTGAATCTTTGCCTTGACGTTTTCGATGGTGTCTGAGGCCTCGACTTCCAGGGTGATTGT 8190 Query 127081 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 || || || || || || || || ||||||||| || Sbjct 8191 CTTTCCAGTGAGCGTCTTAACGAAGATCTGCATGCCT 8227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475360247907280