Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heligmosomoides_20polygyrus_20bakeri_20[genbank_20GCA_5F900096555.1_ 202016-09-19] 23,647 sequences; 696,954,138 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq3 84.2 3e-11 >seq3 Length=1029188 Score = 84.2 bits (92), Expect = 3e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 |||||||| | ||||| ||||| | |||||||||| || | || |||||||| || Sbjct 33014 TAGATGTTCGAGGTGTAGGGCTCGATCGACTCATTGTTGCCGAGAATCTGGGCTGTTGAC 33073 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACC 116003 || ||||||||||| |||| || || |||||||||| ||| Sbjct 33074 GCCGTGGGCATGGGCGCCACCAGCAGACTGTTGCGGACACC 33114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613325854940520