Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heligmosomoides_20polygyrus_20bakeri_20[genbank_20GCA_5F900096555.1_ 202016-09-19] 23,647 sequences; 696,954,138 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq3 102 1e-16 >seq3 Length=1029188 Score = 102 bits (112), Expect = 1e-16 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253 ||||| ||||| || |||||||| | |||| || | | ||| |||| | || |||| | Sbjct 32981 ATCTGGAAGTCACCCGACAGCACTCTTCGGCTGTAGATGTTCGAGGTGTAGGGCTCGATC 33040 Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313 | ||| |||||||||| |||||| || || |||||||||||||| |||| ||||| Sbjct 33041 GACTCATTGTTGCCGAGAATCTGGGCTGTTGACGCCGTGGGCATGGGCGCCACCAGCAGA 33100 Query 204314 GAGTTGCGCACACCGT 204329 |||||| ||||||| Sbjct 33101 CTGTTGCGGACACCGT 33116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794920162062320