Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heligmosomoides_20polygyrus_20bakeri_20[genbank_20GCA_5F900096555.1_ 202016-09-19] 23,647 sequences; 696,954,138 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq3 91.5 2e-13 >seq3 Length=1029188 Score = 91.5 bits (100), Expect = 2e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 109746 TCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGC 109805 |||| ||||||||| | |||||||| |||| ||||||||||||| || || || || Sbjct 33007 TCGGCTGTAGATGTTCGAGGTGTAGGGCTCGATCGACTCATTGTTGCCGAGAATCTGGGC 33066 Query 109806 AGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACC 109853 || || || ||||||||||| |||| || |||||||| |||| ||| Sbjct 33067 TGTTGACGCCGTGGGCATGGGCGCCACCAGCAGACTGTTGCGGACACC 33114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588801906056600