Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heligmosomoides_20polygyrus_20bakeri_20[genbank_20GCA_5F900096555.1_ 202016-09-19] 23,647 sequences; 696,954,138 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq3 114 2e-20 >seq3 Length=1029188 Score = 114 bits (126), Expect = 2e-20 Identities = 117/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 212901 AGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAA 212960 || || || || || |||||||||||||| || ||||| || | ||| | ||| || Sbjct 32966 AGATGTGGATTCACAATCTGGAAGTCACCCGACAGCACTCTTCGGCTGTAGATGTTCGAG 33025 Query 212961 GTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATG 213020 |||||||||||||| ||| ||||| || |||||||| || || || ||||||||| Sbjct 33026 GTGTAGGGCTCGATCGACTCATTGTTGCCGAGAATCTGGGCTGTTGACGCCGTGGGCATG 33085 Query 213021 GGAGCCACCAGGAGACTGTTCCTCACTCCGTGC 213053 || |||||||| |||||||| | || |||||| Sbjct 33086 GGCGCCACCAGCAGACTGTTGCGGACACCGTGC 33118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931257450548480