Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heligmosomoides_20polygyrus_20bakeri_20[genbank_20GCA_5F900096555.1_ 202016-09-19] 23,647 sequences; 696,954,138 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1151 93.3 3e-14 >seq1151 Length=177060 Score = 93.3 bits (102), Expect = 3e-14 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 34319 CAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCA 34378 |||| ||||| ||||| ||| | ||||| | |||||||| |||||| ||||| || | Sbjct 57482 CAGTTTCCGGATTGTCGCATGCTGGACAGAGTACAAACTTCTTGATGAAGCCATCCAGGA 57541 Query 34379 GGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAAT 34438 || || | ||| ||| || || || ||||||||| | || |||||| | | Sbjct 57542 TATCTTGCAGCTTTGCGGCATCATGTTCACCATTGACGATGTAACGCTCGTTTCTCGCGT 57601 Query 34439 CGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGG 34484 || | ||||| ||||||||||| || || |||||||||||||| Sbjct 57602 CGTAATTTGTTTGAGCGCCCAGCTCACAGCCAAAGTACTTTGTCGG 57647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412722619953971