Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heligmosomoides_20polygyrus_20bakeri_20[genbank_20GCA_5F900096555.1_ 202016-09-19] 23,647 sequences; 696,954,138 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq3 84.2 7e-11 >seq3 Length=1029188 Score = 84.2 bits (92), Expect = 7e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 254976 TTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCA 255035 |||| || ||| | ||||| | ||||||| || || || || || ||||| || | Sbjct 37073 TTATCCCGATGCTTCGTGTCTACAACAACACCGCACGATATGTGGACCAAGGCGGAAATA 37014 Query 255036 AACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACAT 255084 | || |||||||||||| ||||||||||||| |||||||| || ||||| Sbjct 37013 AGCGTCCAGGAGCGTTCGCCATCTACCTGGAACCGTGGCATGCGGACAT 36965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1587854770425915