Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01] 34,708 sequences; 81,908,042 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq25885 98.7 1e-15 >seq25885 Length=2931 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 || || || || ||||||||||| ||| || || | ||| ||||| ||||| || Sbjct 798 GTGGACTCCTTCTGTATGTTGTAGTCGGCCAACGTTCGTCCGTCCTCGAGCTGTTTGCCG 857 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 || ||||||| ||||||||||| || || | ||| || ||||| || || || Sbjct 858 GCGAAGATCAGCCGTTGCTGATCCGGCGGAACGCCCTCCTTGTCTTGGATCTTCGTCTTC 917 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | ||||| ||||||| | || || || | ||| | ||| ||||| |||||||| Sbjct 918 ACATTGTCCACAGTGTCCGAGCTCTCCACCTCCAAAGTGATCGTTTTGCCCGTCAATGTC 977 Query 143168 TTTACGAATATTTGCAT 143184 || ||||| |||||||| Sbjct 978 TTCACGAAAATTTGCAT 994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506794431802560