Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01] 34,708 sequences; 81,908,042 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq30328 113 7e-20 >seq30328 Length=6095 Score = 113 bits (124), Expect = 7e-20 Identities = 110/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 125410 CTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTA 125469 |||| | || || ||||| || ||||| || || || ||||| || ||||| ||||| | Sbjct 2243 CTTCTTTTGCGGAGAGACTCGTTGCATTTGCTGCGGTTGAGGGGATTTTCTTCTCGGGGA 2184 Query 125470 GTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTA 125529 ||||||| || || |||||||| || || || || || ||||||| ||||||||||| | Sbjct 2183 GTTTTGCTGCAATTTTTTGGCTTAAAAAACGAGGCCTTTTGCCCGGTCTGACGCACAGCA 2124 Query 125530 ACGAGTTTATATCTCGAGACGA 125551 |||| || || || || ||||| Sbjct 2123 ACGAATTAATTTCGCGTGACGA 2102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740737691466080