Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01] 34,708 sequences; 81,908,042 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq25885 127 2e-24 >seq25885 Length=2931 Score = 127 bits (140), Expect = 2e-24 Identities = 169/234 (72%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 16702 CATTTACCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTA 16761 ||||| || || || || | || |||| || |||||||||||||| ||||||||||| Sbjct 763 CATTT--CCGCCCCGGAGACGGAGGACCAAGTGGAGCGTGGACTCCTTCTGTATGTTGTA 820 Query 16762 GTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTC 16821 |||||||| ||| ||||||| | |||||||| || | || ||||| || || || Sbjct 821 GTCGGCCAACGTTCGTCCGTCCTCGAGCTGTTTGCCGGCGAAGATCAGCCGTTGCTGATC 880 Query 16822 CACAGGCACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGG 16881 | || |||||||| ||||| || | | |||||| | | |||||||||| | Sbjct 881 CGGCGGAACGCCCTCCTTGTCTTGGATCTTCGTCTTCACATTGTCCACAGTGTCCGAGCT 940 Query 16882 CTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||| ||||| ||||| || |||| || || || ||||| ||||| Sbjct 941 CTCCACCTCCAAAGTGATCGTTTTGCCCGTCAATGTCTTCACGAAAATTTGCAT 994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404916646256920