Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01]
34,708 sequences; 81,908,042 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq25885 100 3e-16
seq18571 82.4 8e-11
>seq25885
Length=2931
Score = 100 bits (110), Expect = 3e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 64246 CGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCC 64305
||| || || || || |||||||| || || | || || |||| || ||||| |||||
Sbjct 797 CGTGGACTCCTTCTGTATGTTGTAGTCGGCCAACGTTCGTCCGTCCTCGAGCTGTTTGCC 856
Query 64306 GGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTT 64365
||| | || ||||| ||||| || || |||| || || || ||||| || || |||
Sbjct 857 GGCGAAGATCAGCCGTTGCTGATCCGGCGGAACGCCCTCCTTGTCTTGGATCTTCGTCTT 916
Query 64366 TACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425
||| ||||| || || | ||||| || | ||| | || ||||| ||||| ||
Sbjct 917 CACATTGTCCACAGTGTCCGAGCTCTCCACCTCCAAAGTGATCGTTTTGCCCGTCAATGT 976
Query 64426 TTTTACGAAAATTTGCAT 64443
|| ||||||||||||||
Sbjct 977 CTTCACGAAAATTTGCAT 994
>seq18571
Length=770
Score = 82.4 bits (90), Expect = 8e-11
Identities = 111/151 (74%), Gaps = 3/151 (2%)
Strand=Plus/Minus
Query 64292 TCAAGCTGCT-TGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
|||||| | | | || || ||||||| ||||| ||||| || |||||||| | || ||
Sbjct 589 TCAAGCGGATGTACCAGCGAAAATGAGGCGCTGTTGGTCCGGCGGAATTCCCTGCTTGTC 530
Query 64351 TTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGG 64409
|| || || ||||| ||| ||| | || |||| || || ||||| | || | ||
Sbjct 529 CTGGATCTTC-GCTTTCACATTCTCGATGGTGTCACTCGCCTCGACTTCAAGGGTGATGG 471
Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTG 64440
|||| ||||| | |||||| |||||||||||
Sbjct 470 TCTTCCCGGTGAGAGTTTTGACGAAAATTTG 440
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499428029103520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |