Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01] 34,708 sequences; 81,908,042 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq25885 100 3e-16 seq18571 82.4 8e-11 >seq25885 Length=2931 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 64246 CGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCC 64305 ||| || || || || |||||||| || || | || || |||| || ||||| ||||| Sbjct 797 CGTGGACTCCTTCTGTATGTTGTAGTCGGCCAACGTTCGTCCGTCCTCGAGCTGTTTGCC 856 Query 64306 GGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTT 64365 ||| | || ||||| ||||| || || |||| || || || ||||| || || ||| Sbjct 857 GGCGAAGATCAGCCGTTGCTGATCCGGCGGAACGCCCTCCTTGTCTTGGATCTTCGTCTT 916 Query 64366 TACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 ||| ||||| || || | ||||| || | ||| | || ||||| ||||| || Sbjct 917 CACATTGTCCACAGTGTCCGAGCTCTCCACCTCCAAAGTGATCGTTTTGCCCGTCAATGT 976 Query 64426 TTTTACGAAAATTTGCAT 64443 || |||||||||||||| Sbjct 977 CTTCACGAAAATTTGCAT 994 >seq18571 Length=770 Score = 82.4 bits (90), Expect = 8e-11 Identities = 111/151 (74%), Gaps = 3/151 (2%) Strand=Plus/Minus Query 64292 TCAAGCTGCT-TGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 |||||| | | | || || ||||||| ||||| ||||| || |||||||| | || || Sbjct 589 TCAAGCGGATGTACCAGCGAAAATGAGGCGCTGTTGGTCCGGCGGAATTCCCTGCTTGTC 530 Query 64351 TTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGG 64409 || || || ||||| ||| ||| | || |||| || || ||||| | || | || Sbjct 529 CTGGATCTTC-GCTTTCACATTCTCGATGGTGTCACTCGCCTCGACTTCAAGGGTGATGG 471 Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTG 64440 |||| ||||| | |||||| ||||||||||| Sbjct 470 TCTTCCCGGTGAGAGTTTTGACGAAAATTTG 440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499428029103520