Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01] 34,708 sequences; 81,908,042 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq25885 95.1 1e-14 >seq25885 Length=2931 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| || | ||| | || || || | | |||||||| || |||||||||||| | Sbjct 768 CCGCCCCGGAGACGGAGGACCAAGTGGAGCGTGGACTCCTTCTGTATGTTGTAGTCGGCC 827 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||||||| ||||| |||| |||| || || || || ||||| || Sbjct 828 AACGTTCGTCCGTCCTCGAGCTGTTTGCCGGCGAAGATCAGCCGTTGCTGATCCGGCGGA 887 Query 138508 ATACCTTCTTTGTCGGTGAT-TTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 | || || ||||| ||| || | || |||| ||||| ||||| | |||||| Sbjct 888 ACGCCCTCCTTGTCTTGGATCTTCGTCTTCACATTG-TCCACAGTGTCCGAGCTCTCCAC 946 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | || | |||||| || |||| || || || ||||| |||||| Sbjct 947 CTCCAAAGTGATCGTTTTGCCCGTCAATGTCTTCACGAAAATTTGCATG 995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496047096557760