Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01] 34,708 sequences; 81,908,042 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq7813 125 1e-23 >seq7813 Length=1124 Score = 125 bits (138), Expect = 1e-23 Identities = 158/211 (75%), Gaps = 6/211 (3%) Strand=Plus/Minus Query 203922 CGTACATGTGCATGGAAGACAGTTT-GCTCACGTTGGGGTCGGCCATGTGAATGTTCAGA 203980 |||| | ||||||||| |||||| || | ||| || | || ||||||||||| || Sbjct 406 CGTAAAAGTGCATGGAGCTCAGTTTAGCATA-GTTCGGCTGCGCTATGTGAATGTTAAGG 348 Query 203981 GACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAATGGTCTTCTGC 204040 || ||||||||||| ||||||| || ||||| |||||||| || | |||| ||||||| Sbjct 347 GATTGGCTTTGGTCAATGAAAGCGGCGCGATCGGCGGCCATTTTCAAAATGTCCTTCTGC 288 Query 204041 GAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGTTGAGGC-ACATCTTCCCACGT 204099 | || |||||||| |||||| ||| |||| || | | ||| ||| || ||| | || Sbjct 287 GGTATTTCCCACACGGTCTTGTACAGGTCTTTGATTTCTTGCGGCAACTGCTT--GATGT 230 Query 204100 CCTG-ATCGAGCCGTTGTCGGCCATCAGTCT 204129 ||| | ||| ||||| || || || ||||| Sbjct 229 TCTGCACCGATCCGTTCTCCGCGATTAGTCT 199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794810221916480