Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01]
34,708 sequences; 81,908,042 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq7813 125 1e-23
>seq7813
Length=1124
Score = 125 bits (138), Expect = 1e-23
Identities = 158/211 (75%), Gaps = 6/211 (3%)
Strand=Plus/Minus
Query 203922 CGTACATGTGCATGGAAGACAGTTT-GCTCACGTTGGGGTCGGCCATGTGAATGTTCAGA 203980
|||| | ||||||||| |||||| || | ||| || | || ||||||||||| ||
Sbjct 406 CGTAAAAGTGCATGGAGCTCAGTTTAGCATA-GTTCGGCTGCGCTATGTGAATGTTAAGG 348
Query 203981 GACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAATGGTCTTCTGC 204040
|| ||||||||||| ||||||| || ||||| |||||||| || | |||| |||||||
Sbjct 347 GATTGGCTTTGGTCAATGAAAGCGGCGCGATCGGCGGCCATTTTCAAAATGTCCTTCTGC 288
Query 204041 GAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGTTGAGGC-ACATCTTCCCACGT 204099
| || |||||||| |||||| ||| |||| || | | ||| ||| || ||| | ||
Sbjct 287 GGTATTTCCCACACGGTCTTGTACAGGTCTTTGATTTCTTGCGGCAACTGCTT--GATGT 230
Query 204100 CCTG-ATCGAGCCGTTGTCGGCCATCAGTCT 204129
||| | ||| ||||| || || || |||||
Sbjct 229 TCTGCACCGATCCGTTCTCCGCGATTAGTCT 199
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 794810221916480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |