Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01] 34,708 sequences; 81,908,042 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq5446 96.9 4e-15 >seq5446 Length=1180 Score = 96.9 bits (106), Expect = 4e-15 Identities = 185/272 (68%), Gaps = 7/272 (3%) Strand=Plus/Minus Query 7879 AACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCC 7938 ||||||| | | |||| |||||||||||| ||||| || ||| | || | | ||| Sbjct 977 AACCTTAAAAGGCCAAAGTTTCATATCGTCCTGGACGGTTTTGTCGGTGAATTCCCGTCC 918 Query 7939 GATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGC 7998 || || || || ||||| |||| ||||||| ||||| | | ||||| || || Sbjct 917 AATGAGTCGTTTGGCATCGAAAATGGTGTTTTCCGGGTTTAGAGTCAACTGGTTTTTTGC 858 Query 7999 CGCGTCCCCGATAAGACGTTC-----ATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053 || || ||||| ||||| || | | | | || || || ||||| || || || Sbjct 857 AGCATCTCCGATCAGACGCTCGCCCGAGTCTGGT--GTGAAAGCCACGTAGGAAGGCGTT 800 Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACG 8113 |||| || || ||||| || || || || || || | | |||||| ||||||| || Sbjct 799 ATTCGGTTTCCCTGGTCATTGGCGATTATCTCCACTCTGCCGTTTTTGTAGACGCCAACA 740 Query 8114 CACGAATACGTTGTTCCTAAATCAATACCGAT 8145 || || || || || || | |||||||| || Sbjct 739 CAGGAGTAGGTGGTGCCAAGGTCAATACCAAT 708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634857247634720