Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01]
34,708 sequences; 81,908,042 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq5446 96.9 4e-15
>seq5446
Length=1180
Score = 96.9 bits (106), Expect = 4e-15
Identities = 185/272 (68%), Gaps = 7/272 (3%)
Strand=Plus/Minus
Query 7879 AACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCC 7938
||||||| | | |||| |||||||||||| ||||| || ||| | || | | |||
Sbjct 977 AACCTTAAAAGGCCAAAGTTTCATATCGTCCTGGACGGTTTTGTCGGTGAATTCCCGTCC 918
Query 7939 GATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGC 7998
|| || || || ||||| |||| ||||||| ||||| | | ||||| || ||
Sbjct 917 AATGAGTCGTTTGGCATCGAAAATGGTGTTTTCCGGGTTTAGAGTCAACTGGTTTTTTGC 858
Query 7999 CGCGTCCCCGATAAGACGTTC-----ATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053
|| || ||||| ||||| || | | | | || || || ||||| || || ||
Sbjct 857 AGCATCTCCGATCAGACGCTCGCCCGAGTCTGGT--GTGAAAGCCACGTAGGAAGGCGTT 800
Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACG 8113
|||| || || ||||| || || || || || || | | |||||| ||||||| ||
Sbjct 799 ATTCGGTTTCCCTGGTCATTGGCGATTATCTCCACTCTGCCGTTTTTGTAGACGCCAACA 740
Query 8114 CACGAATACGTTGTTCCTAAATCAATACCGAT 8145
|| || || || || || | |||||||| ||
Sbjct 739 CAGGAGTAGGTGGTGCCAAGGTCAATACCAAT 708
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 634857247634720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |