Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01]
34,708 sequences; 81,908,042 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq31391 102 1e-16
>seq31391
Length=5529
Score = 102 bits (112), Expect = 1e-16
Identities = 147/202 (73%), Gaps = 4/202 (2%)
Strand=Plus/Minus
Query 16050 CGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGA 16109
|||| | ||| || || ||||| || |||||||| | ||||||||| |||| ||
Sbjct 3521 CGTTTCCGTCCAACAGCGTCAATTTCGTCAATGAACAGAATGCATGGTGCCTTTTTCCGC 3462
Query 16110 GCGACTTCAAAGAGATCCCGTACACG-CTTGGCGCCCACACCAACAAACATCTCCACAAA 16168
|| | |||||| | ||||| || || || ||| || ||||| || |||||||||| |||
Sbjct 3461 GCCATTTCAAACATGTCCCGAACTCGGCTAGGC-CCAACACCGACGAACATCTCCAAAAA 3403
Query 16169 GTTTGCGGCGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGA 16227
| | |||| ||| || || || || ||||| | ||| || ||| | ||| |||||
Sbjct 3402 CTCGGAACCGGACACAGTG-ATAAATGGCACATTTGCTTCGCCAGCAGTTGCTTTGGCGA 3344
Query 16228 GAAGAGTCTTACCCGTACCTGG 16249
||||||| ||||| || || ||
Sbjct 3343 GAAGAGTTTTACCAGTGCCCGG 3322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620473090909760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |