Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01] 34,708 sequences; 81,908,042 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq31391 102 1e-16 >seq31391 Length=5529 Score = 102 bits (112), Expect = 1e-16 Identities = 147/202 (73%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 16050 CGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGA 16109 |||| | ||| || || ||||| || |||||||| | ||||||||| |||| || Sbjct 3521 CGTTTCCGTCCAACAGCGTCAATTTCGTCAATGAACAGAATGCATGGTGCCTTTTTCCGC 3462 Query 16110 GCGACTTCAAAGAGATCCCGTACACG-CTTGGCGCCCACACCAACAAACATCTCCACAAA 16168 || | |||||| | ||||| || || || ||| || ||||| || |||||||||| ||| Sbjct 3461 GCCATTTCAAACATGTCCCGAACTCGGCTAGGC-CCAACACCGACGAACATCTCCAAAAA 3403 Query 16169 GTTTGCGGCGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGA 16227 | | |||| ||| || || || || ||||| | ||| || ||| | ||| ||||| Sbjct 3402 CTCGGAACCGGACACAGTG-ATAAATGGCACATTTGCTTCGCCAGCAGTTGCTTTGGCGA 3344 Query 16228 GAAGAGTCTTACCCGTACCTGG 16249 ||||||| ||||| || || || Sbjct 3343 GAAGAGTTTTACCAGTGCCCGG 3322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620473090909760