Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01]
34,708 sequences; 81,908,042 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq3368 91.5 1e-12
seq33500 86.0 5e-11
>seq3368
Length=1335
Score = 91.5 bits (100), Expect = 1e-12
Identities = 70/83 (84%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 552507 GGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCC 552566
|| |||||||||||||| || || || || ||||| ||||| ||||| || ||||||| |
Sbjct 713 GGCATTCCTCCTGCTCCCCGAGGCGTTCCTCAAATCGAAGTCACTTTTGAGATCGATGTC 772
Query 552567 AATGGAATTTTGAATGTGACTGC 552589
|||||||||||| | ||||||||
Sbjct 773 AATGGAATTTTGCACGTGACTGC 795
>seq33500
Length=11382
Score = 86.0 bits (94), Expect = 5e-11
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 550445 GCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCT 550504
|| || |||||||||||| ||||||||||| |||||||||| | || ||||||||
Sbjct 6337 GCAACGAAAGATGCTGGAAAAATTGCTGGACTGCATGTTCTTCGCGTGATAAATGAACCG 6278
Query 550505 ACTGCTGCTGCACTTGCATATGGACTTGATAA 550536
||||| ||||| | || ||||| ||||||||
Sbjct 6277 ACTGCAGCTGCCTTGGCTTATGGTCTTGATAA 6246
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4027460484426920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |