Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01] 34,708 sequences; 81,908,042 total letters Query= NC_021557.1 Length=37378 Score E Sequences producing significant alignments: (Bits) Value seq5635 924 0.0 >seq5635 Length=1580 Score = 924 bits (1024), Expect = 0.0 Identities = 542/559 (97%), Gaps = 2/559 (0%) Strand=Plus/Minus Query 17122 CAGACGGCGATAGCCGATATCATGGAAAAGGGCGGCACGCTTCAAGACTTCCGCAACGAC 17181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1580 CAGACGGCGATAGCCGATATCATGGAAAAGGGCGGCACGCTTCAAGACTTCCGCAACGAC 1521 Query 17182 TTCGACCGGATCGTCTCGAAATACGGCTGGACGTACAAGGGCGATTACGGATGGCGCACC 17241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1520 TTCGACCGGATCGTCTCGAAATACGGCTGGACGTACAAGGGCGATTACGGATGGCGCACC 1461 Query 17242 CGCGTCATTTTCGAAACCAACATGCGAACGGCCTATATGGCGGGCCGCCTCAAACAGATG 17301 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1460 CGCGTCATTTTCGAAACCAACATGCGCACGGCCTATATGGCGGGCCGCCTCAAACAGATG 1401 Query 17302 CGCGACCCGGACGTGCTCAAGCTGCGGCCGTTCTGGGAGTACCGGCACGGCGAAACCCGC 17361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1400 CGCGACCCGGACGTGCTCAAGCTGCGGCCGTTCTGGGAGTACCGGCACGGCGAAACCCGC 1341 Query 17362 AAGCCGAAAATCCCCCGGCCATCCCATGAGGCTTTGCATGGCAGGATTTATCGCCACGAT 17421 ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct 1340 AAGCCGAAAATCCCCCGGCCATCCCATGAGGCTTTGCATGGCAGGATTTATCGTCATGAT 1281 Query 17422 GATCCATGGTGGAAAAAGCACTTTCCGCCGAACGACTGGTATTGCTCCTGCGGCGTCCGC 17481 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1280 GATCCATGGTGGGAAAAGCACTTTCCGCCGAACGACTGGTATTGCTCCTGCGGCGTCCGC 1221 Query 17482 TCGCTCTCGCTGCGCGATCTGAAGCGCCGGGGCATGGATGGTCCGGACGAAGCGCCCGCC 17541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1220 TCGCTCTCGCTGCGCGATCTGAAGCGCCGGGGCATGGATGGTCCGGACGAAGCGCCCGCC 1161 Query 17542 GATCTTATGATGCCTATGATCGATCCGGTTTCCGGCAGTCTGATCGAACAGCCGCAAGGC 17601 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct 1160 GATCTTATGATGCCGATGATCGATCCGGTTTCCGGCAGTCTGATCGAACAGCCGCAGGGT 1101 Query 17602 ATCGGTTTTGGT-TGGGATTATATGCCGGGCGATCTTTGGGAGCGTGGTCTAACGCCATC 17660 ||||||| |||| ||||||||||||||||||||| |||||||||| | ||| | |||||| Sbjct 1100 ATCGGTTATGGTATGGGATTATATGCCGGGCGATGTTTGGGAGCGAGATCTGATGCCATC 1041 Query 17661 C-ACCCTGATGGATGAAGG 17678 | ||||||||| ||| ||| Sbjct 1040 CAACCCTGATGTATGTAGG 1022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119438752124640