Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01] 34,708 sequences; 81,908,042 total letters Query= NC_023588.1 Length=33525 Score E Sequences producing significant alignments: (Bits) Value seq3217 242 8e-60 >seq3217 Length=196 Score = 242 bits (268), Expect = 8e-60 Identities = 164/184 (89%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 28582 GCACAGGAGGTGGCCAATGGCTGATTTCGTCGCGCTGTTGGCTATGTGCGTGCTGCTGCC 28641 || |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct 194 GCGCAGGAGGTGGCCAATGGCTGATTTCGTCGCCCTGTTGGCCATGTGCGTGCTGCTGCC 135 Query 28642 GGTCGCCGGCGCCACGATGCTCAAGATGTGGCAGTCGCGCCCACCGCGCCGCCGGCGCAG 28701 ||| ||||||||||| |||||||||||||||||| ||||||| || || ||||| | || Sbjct 134 GGTGGCCGGCGCCACCATGCTCAAGATGTGGCAGACGCGCCCGCCTCGGCGCCGTCATAG 75 Query 28702 CGGCCTGGCCGTAGGCCAGATCCCACAGGCGCTGCGCCGCCGTGCCCCGATGGCCGTCCG 28761 |||| ||||||| ||||||||||| ||| ||||||||||||| ||||| |||||||| || Sbjct 74 CGGCTTGGCCGTGGGCCAGATCCCGCAGCCGCTGCGCCGCCGCGCCCCCATGGCCGTGCG 15 Query 28762 TCGG 28765 ||| Sbjct 14 CCGG 11 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107114233861752