Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01] 34,708 sequences; 81,908,042 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq25885 96.9 2e-15 >seq25885 Length=2931 Score = 96.9 bits (106), Expect = 2e-15 Identities = 151/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 ||||| || || ||| ||| || ||||||||||| |||| | || ||| |||| || Sbjct 786 ACCAAGTGGAGCGTGGACTCCTTCTGTATGTTGTAGTCGGCCAACGTTCGTCCGTCCTCG 845 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | ||||| ||||| || |||| || |||||||| |||| || || || ||||| Sbjct 846 AGCTGTTTGCCGGCGAAGATCAGCCGTTGCTGATCCGGCGGAACGCCCTCCTTGTCTTGG 905 Query 33661 ATTTTCTGTTTCAACATAGT-CACGGTGTCGCTTGAT-TCCACGTCAACCGTGATCGTTT 33718 || ||| || | |||| || ||| ||||| | | | ||||| || | |||||||||| Sbjct 906 ATCTTC-GTCTTCACATTGTCCACAGTGTC-CGAGCTCTCCACCTCCAAAGTGATCGTTT 963 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || || || || || || || ||||| Sbjct 964 TGCCCGTCAATGTCTTCACGAAAATTTGCAT 994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328564956975360