Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01]
34,708 sequences; 81,908,042 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq25885 96.9 2e-15
>seq25885
Length=2931
Score = 96.9 bits (106), Expect = 2e-15
Identities = 151/211 (72%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600
||||| || || ||| ||| || ||||||||||| |||| | || ||| |||| ||
Sbjct 786 ACCAAGTGGAGCGTGGACTCCTTCTGTATGTTGTAGTCGGCCAACGTTCGTCCGTCCTCG 845
Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660
| ||||| ||||| || |||| || |||||||| |||| || || || |||||
Sbjct 846 AGCTGTTTGCCGGCGAAGATCAGCCGTTGCTGATCCGGCGGAACGCCCTCCTTGTCTTGG 905
Query 33661 ATTTTCTGTTTCAACATAGT-CACGGTGTCGCTTGAT-TCCACGTCAACCGTGATCGTTT 33718
|| ||| || | |||| || ||| ||||| | | | ||||| || | ||||||||||
Sbjct 906 ATCTTC-GTCTTCACATTGTCCACAGTGTC-CGAGCTCTCCACCTCCAAAGTGATCGTTT 963
Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || || || || || || || || |||||
Sbjct 964 TGCCCGTCAATGTCTTCACGAAAATTTGCAT 994
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328564956975360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |