Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01]
34,708 sequences; 81,908,042 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq34234 93.3 1e-15
seq32181 91.5 5e-15
>seq34234
Length=14289
Score = 93.3 bits (102), Expect = 1e-15
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833
||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||
Sbjct 5055 GTAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATCCCGGG 5113
Score = 89.7 bits (98), Expect = 2e-14
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833
|||||||||| |||||||| |||||||||||||||||||||||| ||||||| ||||||
Sbjct 2846 GTAGCTCAGTCGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATCCCGGG 2904
>seq32181
Length=5307
Score = 91.5 bits (100), Expect = 5e-15
Identities = 55/58 (95%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833
|||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||
Sbjct 4851 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATCCCGGG 4794
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15843583194660
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |