Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01] 34,708 sequences; 81,908,042 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq30328 87.8 3e-11 >seq30328 Length=6095 Score = 87.8 bits (96), Expect = 3e-11 Identities = 109/144 (76%), Gaps = 4/144 (3%) Strand=Plus/Minus Query 1456173 TTTGCCGAGCGGCTCGTCGGCTTTGCCGCG-TCGAGGGCATCTTTTTCTCGGGCAGTTTC 1456231 ||||| ||| | ||||| | ||||| ||| | ||||| || || |||||||| ||||| Sbjct 2238 TTTGCGGAGAGACTCGTTGCATTTGCTGCGGTTGAGGGGATTTTCTTCTCGGGGAGTTT- 2180 Query 1456232 TGC-GCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACG 1456290 ||| || || |||||||| || || || ||||| |||||||||| || ||||||| Sbjct 2179 TGCTGCAATTTTTTGGCTTAAAAAACGAGGCCTTTTGCCCGGTCTGACGCAC-AGCAACG 2121 Query 1456291 AATTTATCAGTCGCGACGAAGTTT 1456314 |||| || || |||||||||| Sbjct 2120 AATTAATTTCGCGTGACGAAGTTT 2097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7174463549606696