Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01]
34,708 sequences; 81,908,042 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq30328 87.8 3e-11
>seq30328
Length=6095
Score = 87.8 bits (96), Expect = 3e-11
Identities = 109/144 (76%), Gaps = 4/144 (3%)
Strand=Plus/Minus
Query 1456173 TTTGCCGAGCGGCTCGTCGGCTTTGCCGCG-TCGAGGGCATCTTTTTCTCGGGCAGTTTC 1456231
||||| ||| | ||||| | ||||| ||| | ||||| || || |||||||| |||||
Sbjct 2238 TTTGCGGAGAGACTCGTTGCATTTGCTGCGGTTGAGGGGATTTTCTTCTCGGGGAGTTT- 2180
Query 1456232 TGC-GCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACG 1456290
||| || || |||||||| || || || ||||| |||||||||| || |||||||
Sbjct 2179 TGCTGCAATTTTTTGGCTTAAAAAACGAGGCCTTTTGCCCGGTCTGACGCAC-AGCAACG 2121
Query 1456291 AATTTATCAGTCGCGACGAAGTTT 1456314
|||| || || ||||||||||
Sbjct 2120 AATTAATTTCGCGTGACGAAGTTT 2097
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7174463549606696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |