Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01] 34,708 sequences; 81,908,042 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq25885 154 1e-32 seq10457 107 2e-18 >seq25885 Length=2931 Score = 154 bits (170), Expect = 1e-32 Identities = 162/212 (76%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || | ||| |||||| || |||||||| |||||||| ||||| |||| || Sbjct 786 ACCAAGTGGAGCGTGGACTCCTTCTGTATGTTGTAGTCGGCCAACGTTCGTCCGTCCTCG 845 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 ||||| || || || || |||| ||| ||||| |||| ||||||| ||||||||| | Sbjct 846 AGCTGTTTGCCGGCGAAGATCAGCCGTTGCTGATCCGGCGGAACGCCCTCCTTGTCTTGG 905 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTT 35704 ||||| ||||| | | |||| ||||| |||| |||||||||| ||||||||| Sbjct 906 ATCTTCGTCTTCACATTGTCCACAGTGTCCGAGCTC---TCCACCTCCAAAGTGATCGTT 962 Query 35705 TTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || |||||||| || ||||| || || ||||| Sbjct 963 TTGCCCGTCAATGTCTTCACGAAAATTTGCAT 994 >seq10457 Length=1107 Score = 107 bits (118), Expect = 2e-18 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 35560 GTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTG 35619 ||| || ||||| ||||| |||| || ||||| || || ||||| | ||| ||||| || Sbjct 677 GTAGTCAGCCAACGTTCGGCCGTCCTCGAGCTGTTTGCCGGCAAAAACCAATCGCTGATG 618 Query 35620 GTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCT 35679 || | |||| || ||||||||| ||||||| |||||| | | | || |||| | Sbjct 617 ATCAGCGGGAATGCCCTCCTTGTCAGTGATCTTCCGCTTCACATTCTCGACACTGTCCAT 558 Query 35680 CGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 |||||||||| |||||| ||| || ||||||||||| | || || ||||||| Sbjct 557 GCTGTCCACCTCCAGCGTGATGACTTTGCCGGTCAAAGTTTTGATGAAAATTTGCATTC 499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450598023196640