Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01] 34,708 sequences; 81,908,042 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq30328 96.9 3e-15 >seq30328 Length=6095 Score = 96.9 bits (106), Expect = 3e-15 Identities = 73/86 (85%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 43904 CGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCC 43963 || ||||| |||||||||||| | ||||| || || ||||||||||| || ||||| ||| Sbjct 2499 CGCTTTGCTCAAGAAGTTCAAGTTCCAGAGGCTCGCTGTTTTTATGGTTTCCAAATAGCC 2440 Query 43964 ATAGAAAATATTCATTCGGAAATGTA 43989 || ||||| |||||||| |||||||| Sbjct 2439 ATTGAAAACATTCATTCTGAAATGTA 2414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397287874621540