Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01]
34,708 sequences; 81,908,042 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq34234 82.4 1e-10
seq33211 82.4 1e-10
>seq34234
Length=14289
Score = 82.4 bits (90), Expect = 1e-10
Identities = 60/70 (86%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 145284 TCTTATAGTGTAGTGGTCATCACTTTGGACTTTGAATCCAACAACCCTGGTTCAAATCCA 145343
|| ||| ||||||||| |||||| ||||||||||||||| |||||| ||||| |||||
Sbjct 3213 TCCTATGGTGTAGTGGCTATCACTCTGGACTTTGAATCCAGCAACCCCGGTTCGAATCCG 3272
Query 145344 GGTAGGAGCT 145353
||||||| ||
Sbjct 3273 GGTAGGACCT 3282
>seq33211
Length=8586
Score = 82.4 bits (90), Expect = 1e-10
Identities = 57/65 (88%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 145289 TAGTGTAGTGGTCATCACTTTGGACTTTGAATCCAACAACCCTGGTTCAAATCCAGGTAG 145348
|||||||||||| ||||| ||||||||||||||||| ||||| ||||| ||||| || ||
Sbjct 1138 TAGTGTAGTGGTGATCACATTGGACTTTGAATCCAATAACCCCGGTTCGAATCCGGGCAG 1197
Query 145349 GAGCT 145353
|| ||
Sbjct 1198 GACCT 1202
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627759528316800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |