Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01] 34,708 sequences; 81,908,042 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq31391 84.2 3e-11 >seq31391 Length=5529 Score = 84.2 bits (92), Expect = 3e-11 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 14237 CCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAACTTCA 14296 || || ||||||||||| || ||||| | || |||||| |||| || || | |||| Sbjct 3512 CCAACAGCGTCAATTTCGTCAATGAACAGAATGCATGGTGCCTTTTTCCGCGCCATTTCA 3453 Query 14297 AAGATATCTCGCACTC-TCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGC 14355 || || || || |||| || ||| || ||||| || |||||||||| ||| | || | Sbjct 3452 AACATGTCCCGAACTCGGCTAGGC-CCAACACCGACGAACATCTCCAAAAACTCGGAACC 3394 Query 14356 GGA-ACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCT 14414 ||| ||| | ||| || || || || | ||| || || | ||| |||||| || || | Sbjct 3393 GGACACAGT-GATAAATGGCACATTTGCTTCGCCAGCAGTTGCTTTGGCGAGAAGAGTTT 3335 Query 14415 TCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACC 14448 | || || || || || | ||||| ||||| Sbjct 3334 TACCAGTGCCCGGAGGGCCAGTCAGAAGAGCACC 3301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618166891888480