Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01] 34,708 sequences; 81,908,042 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq25885 86.0 5e-12 >seq25885 Length=2931 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || || || || |||| ||||| | || ||| | || ||||| || Sbjct 995 CATGCAAATTTTCGTGAAGACATTGACGGGCAAAACGATCACTTTGGAGGTGGAGAGCTC 936 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | | || | || || || || |||||||| || ||| | || || ||||| Sbjct 935 GGACACTGTGGACAATGTGAAGACGAAGATCCAAGACAAGGAGGGCGTTCCGCCGGATCA 876 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACA 27165 || || | || | |||||||||||| | || ||| | ||| |||| |||| |||| Sbjct 875 GCAACGGCTGATCTTCGCCGGCAAACAGCTCGAGGAC-GGACGAACGTTGGCCGACTACA 817 Query 27166 ACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 |||| || |||||||| || | || ||||| | ||| | ||||| || Sbjct 816 ACATACAGAAGGAGTCCACGCTCCACTTGGTCCTCCGTCTCCGGGGCGG 768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434729710652160