Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01] 34,708 sequences; 81,908,042 total letters Query= NC_028892.1 Length=49949 Score E Sequences producing significant alignments: (Bits) Value seq7557 114 4e-21 >seq7557 Length=458 Score = 114 bits (126), Expect = 4e-21 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 39081 GAAGTCGATGTCCACGTCGGGCATGGAGACACGCTCAGGGTTCAGGAACCGCTCGAAGAT 39140 |||||||| ||| | ||||||||| |||||||| || ||||||||||| || ||||| | Sbjct 241 GAAGTCGACGTCGAAGTCGGGCATCGAGACACGTTCCGGGTTCAGGAAGCGTTCGAACAG 300 Query 39141 GAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTACGCGGCCAGCGAGCC 39200 || || | || || ||||||||||| | || || || ||||||| || Sbjct 301 CAGGTCGAATTCCAACGGATCGAGGTCGGTGATTTTCAACGCATAGGCCACCAGCGAACC 360 Query 39201 AGCCGCAGAGCCGCGCCCAGGGCCGACCCACACGCCGTTCTCCTTCGCCCAGCCGATGAA 39260 || | ||||||||||| || || ||| |||| ||| ||||||| ||| ||| || Sbjct 361 GGCACCGGAGCCGCGCCCCGGCCCCACCGGCACGTTGTTGTCCTTCGACCACTGGATAAA 420 Query 39261 GTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCT 39298 || |||| |||||||| ||||||||||||| Sbjct 421 CTCCATCACGATCAGGAAGTAGCCGGGGAACCCCATCT 458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159649372182456