Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01]
34,708 sequences; 81,908,042 total letters
Query= NC_028892.1
Length=49949
Score E
Sequences producing significant alignments: (Bits) Value
seq7557 114 4e-21
>seq7557
Length=458
Score = 114 bits (126), Expect = 4e-21
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 39081 GAAGTCGATGTCCACGTCGGGCATGGAGACACGCTCAGGGTTCAGGAACCGCTCGAAGAT 39140
|||||||| ||| | ||||||||| |||||||| || ||||||||||| || ||||| |
Sbjct 241 GAAGTCGACGTCGAAGTCGGGCATCGAGACACGTTCCGGGTTCAGGAAGCGTTCGAACAG 300
Query 39141 GAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTACGCGGCCAGCGAGCC 39200
|| || | || || ||||||||||| | || || || ||||||| ||
Sbjct 301 CAGGTCGAATTCCAACGGATCGAGGTCGGTGATTTTCAACGCATAGGCCACCAGCGAACC 360
Query 39201 AGCCGCAGAGCCGCGCCCAGGGCCGACCCACACGCCGTTCTCCTTCGCCCAGCCGATGAA 39260
|| | ||||||||||| || || ||| |||| ||| ||||||| ||| ||| ||
Sbjct 361 GGCACCGGAGCCGCGCCCCGGCCCCACCGGCACGTTGTTGTCCTTCGACCACTGGATAAA 420
Query 39261 GTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCT 39298
|| |||| |||||||| |||||||||||||
Sbjct 421 CTCCATCACGATCAGGAAGTAGCCGGGGAACCCCATCT 458
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 159649372182456
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |