Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01]
34,708 sequences; 81,908,042 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq25885 104 2e-17
>seq25885
Length=2931
Score = 104 bits (114), Expect = 2e-17
Identities = 151/212 (71%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135
||||| || |||||| ||| || ||||| || || ||||| | |||||| |||| ||
Sbjct 786 ACCAAGTGGAGCGTGGACTCCTTCTGTATGTTGTAGTCGGCCAACGTTCGTCCGTCCTCG 845
Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195
||||||||||| || || || || || ||||| || | || |||| ||| ||||| |
Sbjct 846 AGCTGTTTGCCGGCGAAGATCAGCCGTTGCTGATCCGGCGGAACGCCCTCCTTGTCTTGG 905
Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTT 39252
|| ||| || | | |||| || || ||| |||||| |||| ||||| ||
Sbjct 906 ATCTTCGTCTTCACATTGTCCACAGTGTCCGAGCT---CTCCACCTCCAAAGTGATCGTT 962
Query 39253 TTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|| ||||||| || || || || ||||||||
Sbjct 963 TTGCCCGTCAATGTCTTCACGAAAATTTGCAT 994
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429363900600404
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |