Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01] 34,708 sequences; 81,908,042 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq25885 125 5e-24 >seq25885 Length=2931 Score = 125 bits (138), Expect = 5e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| || || | ||||| |||||||||||| | || || || | || Sbjct 994 ATGCAAATTTTCGTGAAGACATTGACGGGCAAAACGATCACTTTGGAGGTGGAGAGCTCG 935 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||||| || ||| | || || || | | ||||| || || || ||||| ||||| Sbjct 934 GACACTGTGGACAATGTGAAGACGAAGA-TCCAAGACAAGGAGGGCGTTCCGCCGGATCA 876 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || || | || || ||||||||||| || || |||| ||| || || | ||| ||||| Sbjct 875 GCAACGGCTGATCTTCGCCGGCAAACAGCTCGAGGACGGACGAACGTTGGCCGACTACAA 816 Query 23790 CATACAAAAAGAGTCCAC 23807 |||||| || |||||||| Sbjct 815 CATACAGAAGGAGTCCAC 798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337866620671664