Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01]
34,708 sequences; 81,908,042 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq25885 125 5e-24
>seq25885
Length=2931
Score = 125 bits (138), Expect = 5e-24
Identities = 148/198 (75%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| |||||||| || || | ||||| |||||||||||| | || || || | ||
Sbjct 994 ATGCAAATTTTCGTGAAGACATTGACGGGCAAAACGATCACTTTGGAGGTGGAGAGCTCG 935
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||||| || ||| | || || || | | ||||| || || || ||||| |||||
Sbjct 934 GACACTGTGGACAATGTGAAGACGAAGA-TCCAAGACAAGGAGGGCGTTCCGCCGGATCA 876
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|| || | || || ||||||||||| || || |||| ||| || || | ||| |||||
Sbjct 875 GCAACGGCTGATCTTCGCCGGCAAACAGCTCGAGGACGGACGAACGTTGGCCGACTACAA 816
Query 23790 CATACAAAAAGAGTCCAC 23807
|||||| || ||||||||
Sbjct 815 CATACAGAAGGAGTCCAC 798
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337866620671664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |