Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01] 34,708 sequences; 81,908,042 total letters Query= NC_031078.1 Length=50082 Score E Sequences producing significant alignments: (Bits) Value seq7557 113 1e-20 >seq7557 Length=458 Score = 113 bits (124), Expect = 1e-20 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 40166 GAAGTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGAT 40225 |||||||| ||| | ||||||||| || || || || ||||||||||| || ||||| | Sbjct 241 GAAGTCGACGTCGAAGTCGGGCATCGAGACACGTTCCGGGTTCAGGAAGCGTTCGAACAG 300 Query 40226 GAGCCCGTGCGGGATGGGGTCCAGGTCTGTGATGC-CGAGGCAGTAGGCGACCAGCGAAC 40284 || || | || || ||||| ||||| | | ||| ||||| |||||||||| Sbjct 301 CAGGTCGAATTCCAACGGATCGAGGTCGGTGATTTTCAACGCA-TAGGCCACCAGCGAAC 359 Query 40285 CGGCAGCCGAGCCACGTCCGGGTCCGACCCACACGCCGTTCTCCTTGGCCCAGCCGATGA 40344 ||||| | ||||| || || || || ||| |||| ||| ||||| | ||| ||| | Sbjct 360 CGGCACCGGAGCCGCGCCCCGGCCCCACCGGCACGTTGTTGTCCTTCGACCACTGGATAA 419 Query 40345 AGTCGGCGACGACCAGGAAGTAGGACGGGAACCCCAGCT 40383 | || |||| |||||||||| |||||||||| || Sbjct 420 ACTCCATCACGATCAGGAAGTAGCCGGGGAACCCCATCT 458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160074796768224