Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01]
34,708 sequences; 81,908,042 total letters
Query= NC_031080.1
Length=160985
Score E
Sequences producing significant alignments: (Bits) Value
seq7557 89.7 5e-13
>seq7557
Length=458
Score = 89.7 bits (98), Expect = 5e-13
Identities = 116/157 (74%), Gaps = 5/157 (3%)
Strand=Plus/Minus
Query 120456 CGTGCCTGTGCGGGCCGGGCCGTGGATCCGCCGGAGGCTCGCTGGTCACCTACGTCATGG 120515
|||||| ||| |||||||| || || |||| | || |||||||| |||| | ||
Sbjct 394 CGTGCCGGTG-GGGCCGGGGCGCGGCTCCGGTGCCGGTTCGCTGGTGGCCTATGCGTTGA 336
Query 120516 GCATCACCTCGATCGATCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGG 120575
|||||| |||||||| | | | ||||||| ||||||| |||||| | |||||||
Sbjct 335 AAATCACCGACCTCGATCCGTTGGAATTCGACCTGCTGTTCGAACGCTTCCTGAACCCGG 276
Query 120576 ATCGC--CCCGACTTTCCCGACATCGACGTCGACTTC 120610
| || | ||| | |||||| ||||||||||||||
Sbjct 275 AACGTGTCTCGA--TGCCCGACTTCGACGTCGACTTC 241
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 514800556837600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |