Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01]
34,708 sequences; 81,908,042 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq25885 123 2e-23
>seq25885
Length=2931
Score = 123 bits (136), Expect = 2e-23
Identities = 158/213 (74%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGA--GTTGGCGCTCGTCGT 44186
|||| ||| |||||| |||||| || |||||||| ||||| | ||| || |||| |
Sbjct 786 ACCAAGTGGAGCGTGGACTCCTTCTGTATGTTGTAGTCGGCCAACGTT--CGTCCGTCCT 843
Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246
| ||||| || ||||| ||||||| || |||||||| | || || || ||||| ||
Sbjct 844 CGAGCTGTTTGCCGGCGAAGATCAGCCGTTGCTGATCCGGCGGAACGCCCTCCTTGTCTT 903
Query 44247 TTATCTTCTGCTTCA-ATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
|||||| ||||| || ||| | ||||| | | |||||||||| || |||||
Sbjct 904 GGATCTTCGTCTTCACATTGTCC-ACAGTGTCCGAGCTCTCCACCTCCAAAGTGATCGTT 962
Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| ||||| | ||||||||||| |||||||||
Sbjct 963 TTGCCCGTCAATGTCTTCACGAAAATTTGCATG 995
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359838122710836
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |