Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterorhabditis_20bacteriophora_20[genbank_20GCA_5F000223415.1_20201 1-08-22] 1,240 sequences; 76,974,349 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq1221 89.7 6e-13 >seq1221 Length=1649993 Score = 89.7 bits (98), Expect = 6e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 54785 GTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGT 54844 |||| || || || ||||| || ||||||||||| || || || |||||||| ||||| Sbjct 885693 GTTTTCTTATGAAGGTTTGAAACCGCTATTCTAGCAGCAAGTATAGCATAATCTGGATGC 885752 Query 54845 TGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACT 54904 || || || | |||||| |||| || | || | |||||| |||||| |||| ||| Sbjct 885753 TGAGTGGTCATTGAAGCTGCTGTTTCTGCAGCCAAATTGTCCAGTTCTACAGTTGAAACT 885812 Query 54905 CCATTATATATTCCTTGGATAACCTTC 54931 || || || | ||| | ||||| ||| Sbjct 885813 CCTTTGTACAGTCCACGAATAACTTTC 885839 Score = 89.7 bits (98), Expect = 6e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 54785 GTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGT 54844 |||| || || || ||||| || ||||||||||| || || || |||||||| ||||| Sbjct 887050 GTTTTCTTATGAAGGTTTGAAACCGCTATTCTAGCAGCAAGTATAGCATAATCTGGATGC 886991 Query 54845 TGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACT 54904 || || || | |||||| |||| || | || | |||||| |||||| |||| ||| Sbjct 886990 TGAGTGGTCATTGAAGCTGCTGTTTCTGCAGCCAAATTGTCCAGTTCTACAGTTGAAACT 886931 Query 54905 CCATTATATATTCCTTGGATAACCTTC 54931 || || || | ||| | ||||| ||| Sbjct 886930 CCTTTGTACAGTCCACGAATAACTTTC 886904 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 53162 CCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTT 53221 || || ||||| | ||| | || |||||| ||| || || || | |||||| || ||| Sbjct 883079 CCGGATAATACGCGTCGACTATAGATATTAGAGGTGTATGGCTCAATAGACTCGTTGTTT 883138 Query 53222 CCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGA 53281 || | |||||| ||||| || ||||||||||| || || | |||| |||||||| | | Sbjct 883139 CCAAGAATTTGTGCAGTGGAAGCAGTCGGCATTGGAGCAATTAATAGACTATTTCGCACA 883198 Query 53282 CCGTAT 53287 |||||| Sbjct 883199 CCGTAT 883204 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 53162 CCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTT 53221 || || ||||| | ||| | || |||||| ||| || || || | |||||| || ||| Sbjct 889664 CCGGATAATACGCGTCGACTATAGATATTAGAGGTGTATGGCTCAATAGACTCGTTGTTT 889605 Query 53222 CCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGA 53281 || | |||||| ||||| || ||||||||||| || || | |||| |||||||| | | Sbjct 889604 CCAAGAATTTGTGCAGTGGAAGCAGTCGGCATTGGAGCAATTAATAGACTATTTCGCACA 889545 Query 53282 CCGTAT 53287 |||||| Sbjct 889544 CCGTAT 889539 Score = 82.4 bits (90), Expect = 9e-11 Identities = 156/225 (69%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 53410 CTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTT 53469 || |||||| ||||||||| || || || ||| |||||||||| || || || || Sbjct 883448 CTCCTCAGCCAGTTCACAAGATGCTTCCAAGGCAGCGTAATAAATTGTCTCAAAAATTCG 883507 Query 53470 CTTATTTAGATCTTGTGCTTCCAGGCTAT-CAAATGGATAATTTAAGAGAATAAACGCGT 53528 |||||||||||| | |||| |||| || ||| || || | || ||||| || | Sbjct 883508 CTTATTTAGATCACGAGCTT-CAGGAGATGTAAACGGGTATCGCATAAGCATAAATGCAT 883566 Query 53529 CTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA--GATTTCAGC 53586 | || || || |||||||| | || ||||| || || | |||| || || | || Sbjct 883567 CCGCCAACCCCTGAACACCCAATCCAATAGGCCTGTGACGAGTATTTGAACGACGT--GC 883624 Query 53587 TTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTT 53631 |||| || || || || || ||||| || ||||| || || || Sbjct 883625 TTCTTCAACTGGGTAGTAGTTGATATCAATTATTTTGTTTAGATT 883669 Score = 82.4 bits (90), Expect = 9e-11 Identities = 156/225 (69%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 53410 CTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTT 53469 || |||||| ||||||||| || || || ||| |||||||||| || || || || Sbjct 889295 CTCCTCAGCCAGTTCACAAGATGCTTCCAAGGCAGCGTAATAAATTGTCTCAAAAATTCG 889236 Query 53470 CTTATTTAGATCTTGTGCTTCCAGGCTAT-CAAATGGATAATTTAAGAGAATAAACGCGT 53528 |||||||||||| | |||| |||| || ||| || || | || ||||| || | Sbjct 889235 CTTATTTAGATCACGAGCTT-CAGGAGATGTAAACGGGTATCGCATAAGCATAAATGCAT 889177 Query 53529 CTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA--GATTTCAGC 53586 | || || || |||||||| | || ||||| || || | |||| || || | || Sbjct 889176 CCGCCAACCCCTGAACACCCAATCCAATAGGCCTGTGACGAGTATTTGAACGACGT--GC 889119 Query 53587 TTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTT 53631 |||| || || || || || ||||| || ||||| || || || Sbjct 889118 TTCTTCAACTGGGTAGTAGTTGATATCAATTATTTTGTTTAGATT 889074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593712397315200