Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterorhabditis_20bacteriophora_20[genbank_20GCA_5F000223415.1_20201 1-08-22] 1,240 sequences; 76,974,349 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq870 95.1 2e-14 seq971 93.3 6e-14 seq823 91.5 2e-13 >seq870 Length=43228 Score = 95.1 bits (104), Expect = 2e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||||||||| |||| || || || || ||||| || ||| | || | || || | Sbjct 18594 ATGCAAATATTCGTAAAAACCCTTACTGGTAAAACGATCACTCTTGAAGTGGAGGCTTCT 18535 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 |||||||| |||| ||||| || |||||||| |||||||| || || ||||||||| Sbjct 18534 GATACAATCGATAATGTAAAAGCTAAGATTCAAGACAAAGAAGGAATTCCGCCTGATCAA 18475 Query 124659 CAAAGGCTTATTTTTGCAGG 124678 ||| | || ||||| || || Sbjct 18474 CAACGTCTCATTTTCGCTGG 18455 Score = 86.0 bits (94), Expect = 9e-12 Identities = 92/119 (77%), Gaps = 2/119 (2%) Strand=Plus/Minus Query 124667 TATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAA 124726 ||||||| ||||||||||||||||||| ||||||| | || |||||||||||||| Sbjct 18339 TATTTTTT-AGGAAAACAATTAGAGGATGGTCGAACTCTTTCTGACTATAATATTCAAAA 18281 Query 124727 AGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATTCATAAAAA 124784 ||||| || | ||| | || | ||||| ||||| ||||| | | |||| |||||| Sbjct 18280 GGAATCGACACTTCATCTTGTACTTCGTTTGCGAGGAGGTATGCAGATATTCGTAAAAA 18222 >seq971 Length=50814 Score = 93.3 bits (102), Expect = 6e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||| |||| ||||||| || || |||||||| || ||| | ||| ||||||| Sbjct 50367 AATGCAAGTATTCGTAAAGACGCTCACCGGCAAAACGATCACTCTTGAGGTTGAAGCCTC 50426 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| ||| ||||| ||| || || ||||| || || || ||||||||||| Sbjct 50427 CGACACTATTGAGAATGTAAAAGCGAAGATCCAGGATAAGGAGGGAATCCCACCTGATCA 50486 Query 124658 ACAAAGGCTTATTTTTGCAGG 124678 || | || |||||||| || Sbjct 50487 GCAGCGTCTGATTTTTGCTGG 50507 >seq823 Length=9300 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || ||||||| || || |||||||| || ||| | ||| ||||||| Sbjct 8333 ATGCAAATCTTCGTAAAGACGCTCACCGGCAAAACGATCACTCTTGAGGTTGAAGCCTCC 8274 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| ||||| ||| || || ||||| || || || ||||||||||| Sbjct 8273 GACACTATTGAGAATGTAAAAGCGAAGATCCAGGATAAGGAGGGAATCCCACCTGATCAG 8214 Query 124659 CAAAGGCTTATTTTTGCAGG 124678 || | || |||||||| || Sbjct 8213 CAGCGTCTGATTTTTGCTGG 8194 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || ||||||| || || |||||||| || ||| | ||| ||||||| Sbjct 8647 ATGCAAATCTTCGTAAAGACGCTCACCGGCAAAACGATCACTCTTGAGGTTGAAGCCTCC 8588 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| ||||| ||| || || ||||| || || || ||||||||||| Sbjct 8587 GACACTATTGAGAATGTAAAAGCGAAGATCCAGGATAAGGAGGGAATCCCACCTGATCAG 8528 Query 124659 CAAAGGCTTATTTTTGCAGG 124678 || | || |||||||| || Sbjct 8527 CAGCGTCTGATTTTTGCTGG 8508 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || ||||||| || || |||||||| || ||| | ||| ||||||| Sbjct 8960 ATGCAAATCTTCGTAAAGACGCTCACCGGCAAAACGATCACTCTTGAGGTTGAAGCCTCC 8901 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| ||||| ||| || || ||||| || || || ||||||||||| Sbjct 8900 GACACTATTGAGAATGTAAAAGCGAAGATCCAGGATAAGGAGGGAATCCCACCTGATCAG 8841 Query 124659 CAAAGGCTTATTTTTGCAGG 124678 || | || |||||||| || Sbjct 8840 CAGCGTCTGATTTTTGCTGG 8821 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || ||||||| || || |||||||| || ||| | ||| ||||||| Sbjct 9274 ATGCAAATCTTCGTAAAGACGCTCACCGGCAAAACGATCACTCTTGAGGTTGAAGCCTCC 9215 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| ||||| ||| || || ||||| || || || ||||||||||| Sbjct 9214 GACACTATTGAGAATGTAAAAGCGAAGATCCAGGATAAGGAGGGAATCCCACCTGATCAG 9155 Query 124659 CAAAGGCTTATTTTTGCAGG 124678 || | || |||||||| || Sbjct 9154 CAGCGTCTGATTTTTGCTGG 9135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755444290432000