Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterorhabditis_20bacteriophora_20[genbank_20GCA_5F000223415.1_20201 1-08-22] 1,240 sequences; 76,974,349 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq823 96.9 3e-15 seq971 91.5 1e-13 >seq823 Length=9300 Score = 96.9 bits (106), Expect = 3e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||||||||| || || |||||||||||||| | || |||||| | || Sbjct 8334 CATGCAAATCTTCGTAAAGACGCTCACCGGCAAAACGATCACTCTTGAGGTTGAAGCCTC 8275 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | | || | || ||| || || ||| ||||| || | || || || || Sbjct 8274 CGACACTATTGAGAATGTAAAAGCGAAGATCCAGGATAAGGAGGGAATCCCACCTGATCA 8215 Query 31312 GCAGCGTCTAATATTCGCTGG 31332 ||||||||| || || ||||| Sbjct 8214 GCAGCGTCTGATTTTTGCTGG 8194 Score = 96.9 bits (106), Expect = 3e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||||||||| || || |||||||||||||| | || |||||| | || Sbjct 8648 CATGCAAATCTTCGTAAAGACGCTCACCGGCAAAACGATCACTCTTGAGGTTGAAGCCTC 8589 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | | || | || ||| || || ||| ||||| || | || || || || Sbjct 8588 CGACACTATTGAGAATGTAAAAGCGAAGATCCAGGATAAGGAGGGAATCCCACCTGATCA 8529 Query 31312 GCAGCGTCTAATATTCGCTGG 31332 ||||||||| || || ||||| Sbjct 8528 GCAGCGTCTGATTTTTGCTGG 8508 Score = 96.9 bits (106), Expect = 3e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||||||||| || || |||||||||||||| | || |||||| | || Sbjct 8961 CATGCAAATCTTCGTAAAGACGCTCACCGGCAAAACGATCACTCTTGAGGTTGAAGCCTC 8902 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | | || | || ||| || || ||| ||||| || | || || || || Sbjct 8901 CGACACTATTGAGAATGTAAAAGCGAAGATCCAGGATAAGGAGGGAATCCCACCTGATCA 8842 Query 31312 GCAGCGTCTAATATTCGCTGG 31332 ||||||||| || || ||||| Sbjct 8841 GCAGCGTCTGATTTTTGCTGG 8821 Score = 96.9 bits (106), Expect = 3e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||||||||| || || |||||||||||||| | || |||||| | || Sbjct 9275 CATGCAAATCTTCGTAAAGACGCTCACCGGCAAAACGATCACTCTTGAGGTTGAAGCCTC 9216 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | | || | || ||| || || ||| ||||| || | || || || || Sbjct 9215 CGACACTATTGAGAATGTAAAAGCGAAGATCCAGGATAAGGAGGGAATCCCACCTGATCA 9156 Query 31312 GCAGCGTCTAATATTCGCTGG 31332 ||||||||| || || ||||| Sbjct 9155 GCAGCGTCTGATTTTTGCTGG 9135 >seq971 Length=50814 Score = 91.5 bits (100), Expect = 1e-13 Identities = 111/150 (74%), Gaps = 1/150 (1%) Strand=Plus/Plus Query 31184 GAATCAAACA-TGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGT 31242 ||||| || | ||||| | ||||||||||| || || |||||||||||||| | || || Sbjct 50358 GAATCTAAGAATGCAAGTATTCGTAAAGACGCTCACCGGCAAAACGATCACTCTTGAGGT 50417 Query 31243 TGAACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCC 31302 |||| | ||||||| | | || | || ||| || || ||| ||||| || | || Sbjct 50418 TGAAGCCTCCGACACTATTGAGAATGTAAAAGCGAAGATCCAGGATAAGGAGGGAATCCC 50477 Query 31303 GCCCGACCAGCAGCGTCTAATATTCGCTGG 31332 || || ||||||||||| || || ||||| Sbjct 50478 ACCTGATCAGCAGCGTCTGATTTTTGCTGG 50507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445759490620800