Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterorhabditis_20bacteriophora_20[genbank_20GCA_5F000223415.1_20201 1-08-22] 1,240 sequences; 76,974,349 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1221 91.5 2e-13 >seq1221 Length=1649993 Score = 91.5 bits (100), Expect = 2e-13 Identities = 158/225 (70%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 62597 CTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTT 62656 || |||||| ||||||||| || || || ||| |||||||||| || || || || Sbjct 883448 CTCCTCAGCCAGTTCACAAGATGCTTCCAAGGCAGCGTAATAAATTGTCTCAAAAATTCG 883507 Query 62657 CTTATTTAGATCTTGTGCTTCCAGGCTAT-CAAATGGATAATTTAAGAGAATAAACGCGT 62715 |||||||||||| | |||| |||| || ||| || || | || ||||| || | Sbjct 883508 CTTATTTAGATCACGAGCTT-CAGGAGATGTAAACGGGTATCGCATAAGCATAAATGCAT 883566 Query 62716 CCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA--GATTTCAGC 62773 |||| || || |||||||| | || ||||| || || | |||| || || | || Sbjct 883567 CCGCCAACCCCTGAACACCCAATCCAATAGGCCTGTGACGAGTATTTGAACGACGT--GC 883624 Query 62774 TTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT 62818 |||| || || || || || ||||| || ||||| || ||||| Sbjct 883625 TTCTTCAACTGGGTAGTAGTTGATATCAATTATTTTGTTTAGATT 883669 Score = 91.5 bits (100), Expect = 2e-13 Identities = 158/225 (70%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 62597 CTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTT 62656 || |||||| ||||||||| || || || ||| |||||||||| || || || || Sbjct 889295 CTCCTCAGCCAGTTCACAAGATGCTTCCAAGGCAGCGTAATAAATTGTCTCAAAAATTCG 889236 Query 62657 CTTATTTAGATCTTGTGCTTCCAGGCTAT-CAAATGGATAATTTAAGAGAATAAACGCGT 62715 |||||||||||| | |||| |||| || ||| || || | || ||||| || | Sbjct 889235 CTTATTTAGATCACGAGCTT-CAGGAGATGTAAACGGGTATCGCATAAGCATAAATGCAT 889177 Query 62716 CCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA--GATTTCAGC 62773 |||| || || |||||||| | || ||||| || || | |||| || || | || Sbjct 889176 CCGCCAACCCCTGAACACCCAATCCAATAGGCCTGTGACGAGTATTTGAACGACGT--GC 889119 Query 62774 TTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT 62818 |||| || || || || || ||||| || ||||| || ||||| Sbjct 889118 TTCTTCAACTGGGTAGTAGTTGATATCAATTATTTTGTTTAGATT 889074 Score = 84.2 bits (92), Expect = 3e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 62349 CCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTT 62408 || || ||||| | ||| | || |||||| ||| || || || | ||||| || ||| Sbjct 883079 CCGGATAATACGCGTCGACTATAGATATTAGAGGTGTATGGCTCAATAGACTCGTTGTTT 883138 Query 62409 CCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGA 62468 || | |||||| ||||| || ||||||||||| || || | |||| |||||||| | | Sbjct 883139 CCAAGAATTTGTGCAGTGGAAGCAGTCGGCATTGGAGCAATTAATAGACTATTTCGCACA 883198 Query 62469 CCGTAT 62474 |||||| Sbjct 883199 CCGTAT 883204 Score = 84.2 bits (92), Expect = 3e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 62349 CCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTT 62408 || || ||||| | ||| | || |||||| ||| || || || | ||||| || ||| Sbjct 889664 CCGGATAATACGCGTCGACTATAGATATTAGAGGTGTATGGCTCAATAGACTCGTTGTTT 889605 Query 62409 CCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGA 62468 || | |||||| ||||| || ||||||||||| || || | |||| |||||||| | | Sbjct 889604 CCAAGAATTTGTGCAGTGGAAGCAGTCGGCATTGGAGCAATTAATAGACTATTTCGCACA 889545 Query 62469 CCGTAT 62474 |||||| Sbjct 889544 CCGTAT 889539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622937544318400