Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterorhabditis_20bacteriophora_20[genbank_20GCA_5F000223415.1_20201 1-08-22] 1,240 sequences; 76,974,349 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq870 109 5e-19 seq1149 84.2 2e-11 >seq870 Length=43228 Score = 109 bits (120), Expect = 5e-19 Identities = 111/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 22214 TAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAA 22273 |||| |||||||| || || ||||| | || ||||||||| |||||||||||||||| Sbjct 18599 TAAATATGCAAATATTCGTAAAAACCCTTACTGGTAAAACGATCACTCTTGAAGTGGAGG 18540 Query 22274 CCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCG 22333 | | ||||| | || || | ||| || ||||||||||| || || ||||| || | Sbjct 18539 CTTCTGATACAATCGATAATGTAAAAGCTAAGATTCAAGACAAAGAAGGAATTCCGCCTG 18480 Query 22334 ATCAACAACGTCTTATATTTGCCGG 22358 ||||||||||||| || || || || Sbjct 18479 ATCAACAACGTCTCATTTTCGCTGG 18455 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || ||||| | || || || ||| |||||||||||||||| | | Sbjct 18240 ATGCAGATATTCGTAAAAACCCTTACTGGGAAGACGATCACTCTTGAAGTGGAGGCTTCT 18181 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || | | ||| || ||||||||||| || || ||||| || |||||| Sbjct 18180 GATACAATCGAGAACGTAAAAGCTAAGATTCAAGACAAAGAAGGAATTCCGCCTGATCAA 18121 Query 22339 CAACGTCTTATATTTGCCGGCAA 22361 |||||||| || || || || || Sbjct 18120 CAACGTCTCATTTTCGCTGGTAA 18098 >seq1149 Length=232818 Score = 84.2 bits (92), Expect = 2e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 22198 TAGTTTTATACATTTGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTC 22257 || |||| || ||| || |||||||||||||| || ||| | || ||||| || | Sbjct 43328 TAATTTTTGACGTTTTTAGTCATGCAAATTTTTGTGAAGACTCTCACTGGTAAGACTATT 43387 Query 22258 ACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAG 22317 || ||||| || || ||| ||||| | || || | ||| || || ||||| || Sbjct 43388 ACCCTTGAGGTAGAGCCCATTGATACTATCGAAAATGTTAAAGCTAAGATCCAAGATAAA 43447 Query 22318 GAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGG 22358 || || ||||| || |||||||| ||||| || ||||| || Sbjct 43448 GAAGGCATTCCTCCTGATCAACAGCGTCTGATCTTTGCAGG 43488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419721656860600