Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterorhabditis_20bacteriophora_20[genbank_20GCA_5F000223415.1_20201 1-08-22] 1,240 sequences; 76,974,349 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq971 113 1e-19 seq1149 109 1e-18 seq823 109 1e-18 seq870 100 7e-16 >seq971 Length=50814 Score = 113 bits (124), Expect = 1e-19 Identities = 120/157 (76%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 288334 CCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT 288393 || || || ||||||||||| ||| | ||||||||| || ||||||||||| |||||| Sbjct 50507 CCAGCAAAAATCAGACGCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTCGCT 50448 Query 288394 TTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453 || || || || |||| ||| | ||| || || || |||||||| || ||||| || Sbjct 50447 TTTACATTCTCAATAGTGTCGGAGGCTTCAACCTCAAGAGTGATCGTTTTGCCGGTGAGC 50388 Query 288454 GTCTTGACGAATATCTGCATTATGTTATTCT-AATAT 288489 ||||| ||||||| |||||| | ||||| ||||| Sbjct 50387 GTCTTTACGAATACTTGCATTCTTAGATTCTGAATAT 50351 >seq1149 Length=232818 Score = 109 bits (120), Expect = 1e-18 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 288334 CCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT 288393 ||||| |||||||||||||||||| | || || ||||||||||| ||||| || ||| Sbjct 43488 CCTGCAAAGATCAGACGCTGTTGATCAGGAGGAATGCCTTCTTTATCTTGGATCTTAGCT 43429 Query 288394 TTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453 || || ||||| |||| ||| | | ||||| || || || || ||||| || || ||| Sbjct 43428 TTAACATTTTCGATAGTATCAATGGGCTCTACCTCAAGGGTAATAGTCTTACCAGTGAGA 43369 Query 288454 GTCTTGACGAATATCTGCAT 288473 ||||| || || || ||||| Sbjct 43368 GTCTTCACAAAAATTTGCAT 43349 >seq823 Length=9300 Score = 109 bits (120), Expect = 1e-18 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 288334 CCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT 288393 || || || ||||||||||| ||| | ||||||||| || ||||||||||| |||||| Sbjct 8194 CCAGCAAAAATCAGACGCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTCGCT 8253 Query 288394 TTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453 || || || || |||| ||| | ||| || || || |||||||| || ||||| || Sbjct 8254 TTTACATTCTCAATAGTGTCGGAGGCTTCAACCTCAAGAGTGATCGTTTTGCCGGTGAGC 8313 Query 288454 GTCTTGACGAATATCTGCAT 288473 ||||| ||||| || ||||| Sbjct 8314 GTCTTTACGAAGATTTGCAT 8333 Score = 109 bits (120), Expect = 1e-18 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 288334 CCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT 288393 || || || ||||||||||| ||| | ||||||||| || ||||||||||| |||||| Sbjct 8508 CCAGCAAAAATCAGACGCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTCGCT 8567 Query 288394 TTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453 || || || || |||| ||| | ||| || || || |||||||| || ||||| || Sbjct 8568 TTTACATTCTCAATAGTGTCGGAGGCTTCAACCTCAAGAGTGATCGTTTTGCCGGTGAGC 8627 Query 288454 GTCTTGACGAATATCTGCAT 288473 ||||| ||||| || ||||| Sbjct 8628 GTCTTTACGAAGATTTGCAT 8647 Score = 109 bits (120), Expect = 1e-18 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 288334 CCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT 288393 || || || ||||||||||| ||| | ||||||||| || ||||||||||| |||||| Sbjct 8821 CCAGCAAAAATCAGACGCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTCGCT 8880 Query 288394 TTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453 || || || || |||| ||| | ||| || || || |||||||| || ||||| || Sbjct 8881 TTTACATTCTCAATAGTGTCGGAGGCTTCAACCTCAAGAGTGATCGTTTTGCCGGTGAGC 8940 Query 288454 GTCTTGACGAATATCTGCAT 288473 ||||| ||||| || ||||| Sbjct 8941 GTCTTTACGAAGATTTGCAT 8960 Score = 109 bits (120), Expect = 1e-18 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 288334 CCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT 288393 || || || ||||||||||| ||| | ||||||||| || ||||||||||| |||||| Sbjct 9135 CCAGCAAAAATCAGACGCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTCGCT 9194 Query 288394 TTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453 || || || || |||| ||| | ||| || || || |||||||| || ||||| || Sbjct 9195 TTTACATTCTCAATAGTGTCGGAGGCTTCAACCTCAAGAGTGATCGTTTTGCCGGTGAGC 9254 Query 288454 GTCTTGACGAATATCTGCAT 288473 ||||| ||||| || ||||| Sbjct 9255 GTCTTTACGAAGATTTGCAT 9274 >seq870 Length=43228 Score = 100 bits (110), Expect = 7e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390 || || ||||| || ||||| |||||| | || ||||||||||| || || || || Sbjct 18098 TTACCAGCGAAAATGAGACGTTGTTGATCAGGCGGAATTCCTTCTTTGTCTTGAATCTTA 18157 Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450 ||||| ||||| || || | ||| | || ||||| || |||||||||||||| || Sbjct 18158 GCTTTTACGTTCTCGATTGTATCAGAAGCCTCCACTTCAAGAGTGATCGTCTTCCCAGTA 18217 Query 288451 AGAGTCTTGACGAATATCTGCAT 288473 || || || |||||||||||||| Sbjct 18218 AGGGTTTTTACGAATATCTGCAT 18240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179635658240720