Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterorhabditis_20bacteriophora_20[genbank_20GCA_5F000223415.1_20201
1-08-22] 1,240 sequences; 76,974,349 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq971 113 1e-19
seq1149 109 1e-18
seq823 109 1e-18
seq870 100 7e-16
>seq971
Length=50814
Score = 113 bits (124), Expect = 1e-19
Identities = 120/157 (76%), Gaps = 1/157 (1%)
Strand=Plus/Minus
Query 288334 CCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT 288393
|| || || ||||||||||| ||| | ||||||||| || ||||||||||| ||||||
Sbjct 50507 CCAGCAAAAATCAGACGCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTCGCT 50448
Query 288394 TTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453
|| || || || |||| ||| | ||| || || || |||||||| || ||||| ||
Sbjct 50447 TTTACATTCTCAATAGTGTCGGAGGCTTCAACCTCAAGAGTGATCGTTTTGCCGGTGAGC 50388
Query 288454 GTCTTGACGAATATCTGCATTATGTTATTCT-AATAT 288489
||||| ||||||| |||||| | ||||| |||||
Sbjct 50387 GTCTTTACGAATACTTGCATTCTTAGATTCTGAATAT 50351
>seq1149
Length=232818
Score = 109 bits (120), Expect = 1e-18
Identities = 108/140 (77%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 288334 CCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT 288393
||||| |||||||||||||||||| | || || ||||||||||| ||||| || |||
Sbjct 43488 CCTGCAAAGATCAGACGCTGTTGATCAGGAGGAATGCCTTCTTTATCTTGGATCTTAGCT 43429
Query 288394 TTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453
|| || ||||| |||| ||| | | ||||| || || || || ||||| || || |||
Sbjct 43428 TTAACATTTTCGATAGTATCAATGGGCTCTACCTCAAGGGTAATAGTCTTACCAGTGAGA 43369
Query 288454 GTCTTGACGAATATCTGCAT 288473
||||| || || || |||||
Sbjct 43368 GTCTTCACAAAAATTTGCAT 43349
>seq823
Length=9300
Score = 109 bits (120), Expect = 1e-18
Identities = 108/140 (77%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 288334 CCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT 288393
|| || || ||||||||||| ||| | ||||||||| || ||||||||||| ||||||
Sbjct 8194 CCAGCAAAAATCAGACGCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTCGCT 8253
Query 288394 TTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453
|| || || || |||| ||| | ||| || || || |||||||| || ||||| ||
Sbjct 8254 TTTACATTCTCAATAGTGTCGGAGGCTTCAACCTCAAGAGTGATCGTTTTGCCGGTGAGC 8313
Query 288454 GTCTTGACGAATATCTGCAT 288473
||||| ||||| || |||||
Sbjct 8314 GTCTTTACGAAGATTTGCAT 8333
Score = 109 bits (120), Expect = 1e-18
Identities = 108/140 (77%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 288334 CCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT 288393
|| || || ||||||||||| ||| | ||||||||| || ||||||||||| ||||||
Sbjct 8508 CCAGCAAAAATCAGACGCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTCGCT 8567
Query 288394 TTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453
|| || || || |||| ||| | ||| || || || |||||||| || ||||| ||
Sbjct 8568 TTTACATTCTCAATAGTGTCGGAGGCTTCAACCTCAAGAGTGATCGTTTTGCCGGTGAGC 8627
Query 288454 GTCTTGACGAATATCTGCAT 288473
||||| ||||| || |||||
Sbjct 8628 GTCTTTACGAAGATTTGCAT 8647
Score = 109 bits (120), Expect = 1e-18
Identities = 108/140 (77%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 288334 CCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT 288393
|| || || ||||||||||| ||| | ||||||||| || ||||||||||| ||||||
Sbjct 8821 CCAGCAAAAATCAGACGCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTCGCT 8880
Query 288394 TTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453
|| || || || |||| ||| | ||| || || || |||||||| || ||||| ||
Sbjct 8881 TTTACATTCTCAATAGTGTCGGAGGCTTCAACCTCAAGAGTGATCGTTTTGCCGGTGAGC 8940
Query 288454 GTCTTGACGAATATCTGCAT 288473
||||| ||||| || |||||
Sbjct 8941 GTCTTTACGAAGATTTGCAT 8960
Score = 109 bits (120), Expect = 1e-18
Identities = 108/140 (77%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 288334 CCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT 288393
|| || || ||||||||||| ||| | ||||||||| || ||||||||||| ||||||
Sbjct 9135 CCAGCAAAAATCAGACGCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTCGCT 9194
Query 288394 TTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453
|| || || || |||| ||| | ||| || || || |||||||| || ||||| ||
Sbjct 9195 TTTACATTCTCAATAGTGTCGGAGGCTTCAACCTCAAGAGTGATCGTTTTGCCGGTGAGC 9254
Query 288454 GTCTTGACGAATATCTGCAT 288473
||||| ||||| || |||||
Sbjct 9255 GTCTTTACGAAGATTTGCAT 9274
>seq870
Length=43228
Score = 100 bits (110), Expect = 7e-16
Identities = 108/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390
|| || ||||| || ||||| |||||| | || ||||||||||| || || || ||
Sbjct 18098 TTACCAGCGAAAATGAGACGTTGTTGATCAGGCGGAATTCCTTCTTTGTCTTGAATCTTA 18157
Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450
||||| ||||| || || | ||| | || ||||| || |||||||||||||| ||
Sbjct 18158 GCTTTTACGTTCTCGATTGTATCAGAAGCCTCCACTTCAAGAGTGATCGTCTTCCCAGTA 18217
Query 288451 AGAGTCTTGACGAATATCTGCAT 288473
|| || || ||||||||||||||
Sbjct 18218 AGGGTTTTTACGAATATCTGCAT 18240
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179635658240720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |