Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterorhabditis_20bacteriophora_20[genbank_20GCA_5F000223415.1_20201 1-08-22] 1,240 sequences; 76,974,349 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq870 89.7 5e-13 >seq870 Length=43228 Score = 89.7 bits (98), Expect = 5e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 64311 AAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAA 64370 ||||||| || || || || || |||||||||||||| ||||| || || |||||| Sbjct 18462 AAATGAGACGTTGTTGATCAGGCGGAATTCCTTCTTTGTCTTGAATCTTAGCTTTTACAT 18521 Query 64371 CCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTA 64430 || | ||||||| || |||||||| | ||| | || || || || | ||||||| Sbjct 18522 TATCGATTGTATCAGAAGCCTCCACTTCAAGAGTGATCGTTTTACCAGTAAGGGTTTTTA 18581 Query 64431 CGAAAATTTGCATTTTAAT 64449 |||| |||||||| || || Sbjct 18582 CGAATATTTGCATATTTAT 18600 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 64311 AAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAA 64370 ||||||| || || || || || |||||||||||||| ||||| || || ||||| Sbjct 18108 AAATGAGACGTTGTTGATCAGGCGGAATTCCTTCTTTGTCTTGAATCTTAGCTTTTACGT 18167 Query 64371 CCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTA 64430 ||| | ||||||| || |||||||| | ||| | ||||| || || | ||||||| Sbjct 18168 TCTCGATTGTATCAGAAGCCTCCACTTCAAGAGTGATCGTCTTCCCAGTAAGGGTTTTTA 18227 Query 64431 CGAAAATTTGCAT 64443 |||| || ||||| Sbjct 18228 CGAATATCTGCAT 18240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499637055505600