Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterorhabditis_20bacteriophora_20[genbank_20GCA_5F000223415.1_20201 1-08-22] 1,240 sequences; 76,974,349 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq1221 104 3e-17 >seq1221 Length=1649993 Score = 104 bits (114), Expect = 3e-17 Identities = 110/144 (76%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 48306 ATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCT 48365 |||||||||||||| || || | || || || | |||||||||||||||| || ||| Sbjct 884623 ATATCAGCATGCCAAGGCTCGAGGTAAATAGCGAAGGCACCTGGTCGTTTATTTCCACCT 884682 Query 48366 TGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGAT 48425 ||||||| ||| | || ||||| ||||| || | || |||||| | | ||||||||| Sbjct 884683 TGATCTACATAGCGAGCGGTATTATTATATACACGTAGCATTGGTATTAAACCATTTGAA 884742 Query 48426 ATACCATTGGTTCCCGAAATATAA 48449 ||||||| || | |||||| || Sbjct 884743 GTACCATTAGT--CTGAAATAAAA 884764 Score = 104 bits (114), Expect = 3e-17 Identities = 110/144 (76%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 48306 ATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCT 48365 |||||||||||||| || || | || || || | |||||||||||||||| || ||| Sbjct 888120 ATATCAGCATGCCAAGGCTCGAGGTAAATAGCGAAGGCACCTGGTCGTTTATTTCCACCT 888061 Query 48366 TGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGAT 48425 ||||||| ||| | || ||||| ||||| || | || |||||| | | ||||||||| Sbjct 888060 TGATCTACATAGCGAGCGGTATTATTATATACACGTAGCATTGGTATTAAACCATTTGAA 888001 Query 48426 ATACCATTGGTTCCCGAAATATAA 48449 ||||||| || | |||||| || Sbjct 888000 GTACCATTAGT--CTGAAATAAAA 887979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562100087313600