Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterorhabditis_20bacteriophora_20[genbank_20GCA_5F000223415.1_20201 1-08-22] 1,240 sequences; 76,974,349 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq870 104 5e-17 seq1149 89.7 1e-12 >seq870 Length=43228 Score = 104 bits (114), Expect = 5e-17 Identities = 112/147 (76%), Gaps = 1/147 (1%) Strand=Plus/Plus Query 192396 ACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATT 192455 |||||| || || | | ||||||||||| || ||||||||||| ||||| || ||| Sbjct 18454 ACCAGCGAAAATGAGACGTTGTTGATCAGGCGGAATTCCTTCTTTGTCTTGAATCTTAGC 18513 Query 192456 TTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAA 192515 |||||||||| || | ||| || | || ||||| ||||| || ||||||||||| | Sbjct 18514 TTTTACATTATCGATTGTATCAGAAGCCTCCACTTCAAGAGTGATCGTTTTACCAGTAAG 18573 Query 192516 TGTTTTAATAAATATCTGCAT-TTTAT 192541 ||||| | ||||| ||||| ||||| Sbjct 18574 GGTTTTTACGAATATTTGCATATTTAT 18600 Score = 91.5 bits (100), Expect = 3e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 192394 TTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTA 192453 |||||||| || || | | ||||||||||| || ||||||||||| ||||| || ||| Sbjct 18098 TTACCAGCGAAAATGAGACGTTGTTGATCAGGCGGAATTCCTTCTTTGTCTTGAATCTTA 18157 Query 192454 TTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTT 192513 |||||| || || | ||| || | || ||||| ||||| || || || ||||| Sbjct 18158 GCTTTTACGTTCTCGATTGTATCAGAAGCCTCCACTTCAAGAGTGATCGTCTTCCCAGTA 18217 Query 192514 AATGTTTTAATAAATATCTGCAT 192536 | ||||| | ||||||||||| Sbjct 18218 AGGGTTTTTACGAATATCTGCAT 18240 >seq1149 Length=232818 Score = 89.7 bits (98), Expect = 1e-12 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 192395 TACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 192454 |||| |||||||| | | |||||||||||| || || |||||||||||||| || ||| Sbjct 43490 TACCTGCAAAGATCAGACGCTGTTGATCAGGAGGAATGCCTTCTTTATCTTGGATCTTAG 43431 Query 192455 TTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 192514 ||| ||||| |||| ||| | ||||| || || ||||| || |||||||| | Sbjct 43430 CTTTAACATTTTCGATAGTATCAATGGGCTCTACCTCAAGGGTAATAGTCTTACCAGTGA 43371 Query 192515 ATGTTTTAATAAATATCTGCAT 192536 || || | ||| || ||||| Sbjct 43370 GAGTCTTCACAAAAATTTGCAT 43349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984464359074000