Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterorhabditis_20bacteriophora_20[genbank_20GCA_5F000223415.1_20201 1-08-22] 1,240 sequences; 76,974,349 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq870 113 8e-20 seq971 86.0 1e-11 seq823 84.2 4e-11 >seq870 Length=43228 Score = 113 bits (124), Expect = 8e-20 Identities = 114/147 (78%), Gaps = 1/147 (1%) Strand=Plus/Plus Query 171929 ACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATT 171988 |||||| ||||| | | ||||| ||||| || ||||||||||| ||||| || ||| Sbjct 18454 ACCAGCGAAAATGAGACGTTGTTGATCAGGCGGAATTCCTTCTTTGTCTTGAATCTTAGC 18513 Query 171989 TTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAA 172048 |||||||||| || ||||| || | || ||||| ||||| || ||||||||||| | Sbjct 18514 TTTTACATTATCGATTGTATCAGAAGCCTCCACTTCAAGAGTGATCGTTTTACCAGTAAG 18573 Query 172049 TGTTTTAATGAATATCTGCAT-TTTAT 172074 ||||| | |||||| ||||| ||||| Sbjct 18574 GGTTTTTACGAATATTTGCATATTTAT 18600 Score = 100 bits (110), Expect = 5e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 171927 TTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTA 171986 |||||||| ||||| | | ||||| ||||| || ||||||||||| ||||| || ||| Sbjct 18098 TTACCAGCGAAAATGAGACGTTGTTGATCAGGCGGAATTCCTTCTTTGTCTTGAATCTTA 18157 Query 171987 TTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTT 172046 |||||| || || ||||| || | || ||||| ||||| || || || ||||| Sbjct 18158 GCTTTTACGTTCTCGATTGTATCAGAAGCCTCCACTTCAAGAGTGATCGTCTTCCCAGTA 18217 Query 172047 AATGTTTTAATGAATATCTGCAT 172069 | ||||| | |||||||||||| Sbjct 18218 AGGGTTTTTACGAATATCTGCAT 18240 >seq971 Length=50814 Score = 86.0 bits (94), Expect = 1e-11 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 171929 ACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATT 171988 |||||||||||| | | ||| || |||||||| ||||| || ||||| || || || Sbjct 50508 ACCAGCAAAAATCAGACGCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTCGC 50449 Query 171989 TTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAA 172048 ||||||||| ||||| || || | ||| || || ||||| || ||||| || || | Sbjct 50448 TTTTACATTCTCAATAGTGTCGGAGGCTTCAACCTCAAGAGTGATCGTTTTGCCGGTGAG 50389 Query 172049 TGTTTTAATGAATATCTGCATT 172070 || || | ||||| |||||| Sbjct 50388 CGTCTTTACGAATACTTGCATT 50367 >seq823 Length=9300 Score = 84.2 bits (92), Expect = 4e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 171929 ACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATT 171988 |||||||||||| | | ||| || |||||||| ||||| || ||||| || || || Sbjct 8193 ACCAGCAAAAATCAGACGCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTCGC 8252 Query 171989 TTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAA 172048 ||||||||| ||||| || || | ||| || || ||||| || ||||| || || | Sbjct 8253 TTTTACATTCTCAATAGTGTCGGAGGCTTCAACCTCAAGAGTGATCGTTTTGCCGGTGAG 8312 Query 172049 TGTTTTAATGAATATCTGCAT 172069 || || | ||| || ||||| Sbjct 8313 CGTCTTTACGAAGATTTGCAT 8333 Score = 84.2 bits (92), Expect = 4e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 171929 ACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATT 171988 |||||||||||| | | ||| || |||||||| ||||| || ||||| || || || Sbjct 8507 ACCAGCAAAAATCAGACGCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTCGC 8566 Query 171989 TTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAA 172048 ||||||||| ||||| || || | ||| || || ||||| || ||||| || || | Sbjct 8567 TTTTACATTCTCAATAGTGTCGGAGGCTTCAACCTCAAGAGTGATCGTTTTGCCGGTGAG 8626 Query 172049 TGTTTTAATGAATATCTGCAT 172069 || || | ||| || ||||| Sbjct 8627 CGTCTTTACGAAGATTTGCAT 8647 Score = 84.2 bits (92), Expect = 4e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 171929 ACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATT 171988 |||||||||||| | | ||| || |||||||| ||||| || ||||| || || || Sbjct 8820 ACCAGCAAAAATCAGACGCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTCGC 8879 Query 171989 TTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAA 172048 ||||||||| ||||| || || | ||| || || ||||| || ||||| || || | Sbjct 8880 TTTTACATTCTCAATAGTGTCGGAGGCTTCAACCTCAAGAGTGATCGTTTTGCCGGTGAG 8939 Query 172049 TGTTTTAATGAATATCTGCAT 172069 || || | ||| || ||||| Sbjct 8940 CGTCTTTACGAAGATTTGCAT 8960 Score = 84.2 bits (92), Expect = 4e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 171929 ACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATT 171988 |||||||||||| | | ||| || |||||||| ||||| || ||||| || || || Sbjct 9134 ACCAGCAAAAATCAGACGCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTCGC 9193 Query 171989 TTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAA 172048 ||||||||| ||||| || || | ||| || || ||||| || ||||| || || | Sbjct 9194 TTTTACATTCTCAATAGTGTCGGAGGCTTCAACCTCAAGAGTGATCGTTTTGCCGGTGAG 9253 Query 172049 TGTTTTAATGAATATCTGCAT 172069 || || | ||| || ||||| Sbjct 9254 CGTCTTTACGAAGATTTGCAT 9274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905121970392000