Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterorhabditis_20bacteriophora_20[genbank_20GCA_5F000223415.1_20201 1-08-22] 1,240 sequences; 76,974,349 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1149 104 2e-17 seq870 95.1 1e-14 >seq1149 Length=232818 Score = 104 bits (114), Expect = 2e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | || || || || ||||| |||||||| || || ||||| ||| Sbjct 43349 ATGCAAATTTTTGTGAAGACTCTCACTGGTAAGACTATTACCCTTGAGGTAGAGCCCATT 43408 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| || ||| ||||||||||| |||||||| || ||||| |||||| Sbjct 43409 GATACTATCGAAAATGTTAAAGCTAAGATCCAAGATAAAGAAGGCATTCCTCCTGATCAA 43468 Query 24824 CAACGTTTGATCTTTGCCGG 24843 || ||| |||||||||| || Sbjct 43469 CAGCGTCTGATCTTTGCAGG 43488 >seq870 Length=43228 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | ||||| || || |||||||| || || || ||||| || || | Sbjct 18594 ATGCAAATATTCGTAAAAACCCTTACTGGTAAAACGATCACTCTTGAAGTGGAGGCTTCT 18535 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | || | |||||| ||||| ||||||||||||||||| || || |||||| Sbjct 18534 GATACAATCGATAATGTAAAAGCTAAGATTCAAGACAAAGAAGGAATTCCGCCTGATCAA 18475 Query 24824 CAACGTTTGATCTTTGCCGG 24843 |||||| | || || || || Sbjct 18474 CAACGTCTCATTTTCGCTGG 18455 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | ||||| || || || || || || || || ||||| || || | Sbjct 18240 ATGCAGATATTCGTAAAAACCCTTACTGGGAAGACGATCACTCTTGAAGTGGAGGCTTCT 18181 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | || | |||||| ||||| ||||||||||||||||| || || |||||| Sbjct 18180 GATACAATCGAGAACGTAAAAGCTAAGATTCAAGACAAAGAAGGAATTCCGCCTGATCAA 18121 Query 24824 CAACGTTTGATCTTTGCCGGGAA 24846 |||||| | || || || || || Sbjct 18120 CAACGTCTCATTTTCGCTGGTAA 18098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449890626587200