Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterorhabditis_20bacteriophora_20[genbank_20GCA_5F000223415.1_20201 1-08-22] 1,240 sequences; 76,974,349 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq870 96.9 3e-15 >seq870 Length=43228 Score = 96.9 bits (106), Expect = 3e-15 Identities = 106/137 (77%), Gaps = 3/137 (2%) Strand=Plus/Plus Query 29664 TTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAG 29722 ||| ||||| |||||||| || ||||||||||| ||| || | ||| ||| | || | | Sbjct 18472 TTGTTGATCAGGCGGAATTCCTTCTTTGTCTTG-AATCTTAGCTTTTACATTATCGATTG 18530 Query 29723 TGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCT 29782 | |||||| || ||||||||||| || ||||| ||||| | |||||| || ||||| | Sbjct 18531 TATCAGAAGCCTCCACTTCAAGAGTGATCGTTTTACCAGTAAGGGTTTTTACGAATATTT 18590 Query 29783 GCAT-TTTAAAACGTAT 29798 |||| |||| | |||| Sbjct 18591 GCATATTTATGAAGTAT 18607 Score = 91.5 bits (100), Expect = 1e-13 Identities = 96/124 (77%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 29664 TTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAG 29722 ||| ||||| |||||||| || ||||||||||| ||| || | ||| || | || | | Sbjct 18118 TTGTTGATCAGGCGGAATTCCTTCTTTGTCTTG-AATCTTAGCTTTTACGTTCTCGATTG 18176 Query 29723 TGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCT 29782 | |||||| || ||||||||||| || || || ||||| | |||||| || ||||||| Sbjct 18177 TATCAGAAGCCTCCACTTCAAGAGTGATCGTCTTCCCAGTAAGGGTTTTTACGAATATCT 18236 Query 29783 GCAT 29786 |||| Sbjct 18237 GCAT 18240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385213378374840