Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterorhabditis_20bacteriophora_20[genbank_20GCA_5F000223415.1_20201 1-08-22] 1,240 sequences; 76,974,349 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq823 86.0 6e-12 seq971 84.2 2e-11 >seq823 Length=9300 Score = 86.0 bits (94), Expect = 6e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 || |||||||||| |||||||||||| || || || || || || || || || || | Sbjct 8194 CCAGCAAAAATCAGACGCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTCGCT 8253 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 || || || | |||||||| | ||| || || ||||| || ||||| ||||| | Sbjct 8254 TTTACATTCTCAATAGTGTCGGAGGCTTCAACCTCAAGAGTGATCGTTTTGCCGGTGAGC 8313 Query 134694 GTTTTAACGAAAATTTGCAT 134713 || || ||||| |||||||| Sbjct 8314 GTCTTTACGAAGATTTGCAT 8333 Score = 86.0 bits (94), Expect = 6e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 || |||||||||| |||||||||||| || || || || || || || || || || | Sbjct 8508 CCAGCAAAAATCAGACGCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTCGCT 8567 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 || || || | |||||||| | ||| || || ||||| || ||||| ||||| | Sbjct 8568 TTTACATTCTCAATAGTGTCGGAGGCTTCAACCTCAAGAGTGATCGTTTTGCCGGTGAGC 8627 Query 134694 GTTTTAACGAAAATTTGCAT 134713 || || ||||| |||||||| Sbjct 8628 GTCTTTACGAAGATTTGCAT 8647 Score = 86.0 bits (94), Expect = 6e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 || |||||||||| |||||||||||| || || || || || || || || || || | Sbjct 8821 CCAGCAAAAATCAGACGCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTCGCT 8880 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 || || || | |||||||| | ||| || || ||||| || ||||| ||||| | Sbjct 8881 TTTACATTCTCAATAGTGTCGGAGGCTTCAACCTCAAGAGTGATCGTTTTGCCGGTGAGC 8940 Query 134694 GTTTTAACGAAAATTTGCAT 134713 || || ||||| |||||||| Sbjct 8941 GTCTTTACGAAGATTTGCAT 8960 Score = 86.0 bits (94), Expect = 6e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 || |||||||||| |||||||||||| || || || || || || || || || || | Sbjct 9135 CCAGCAAAAATCAGACGCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTCGCT 9194 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 || || || | |||||||| | ||| || || ||||| || ||||| ||||| | Sbjct 9195 TTTACATTCTCAATAGTGTCGGAGGCTTCAACCTCAAGAGTGATCGTTTTGCCGGTGAGC 9254 Query 134694 GTTTTAACGAAAATTTGCAT 134713 || || ||||| |||||||| Sbjct 9255 GTCTTTACGAAGATTTGCAT 9274 >seq971 Length=50814 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 || |||||||||| |||||||||||| || || || || || || || || || || | Sbjct 50507 CCAGCAAAAATCAGACGCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTCGCT 50448 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 || || || | |||||||| | ||| || || ||||| || ||||| ||||| | Sbjct 50447 TTTACATTCTCAATAGTGTCGGAGGCTTCAACCTCAAGAGTGATCGTTTTGCCGGTGAGC 50388 Query 134694 GTTTTAACGAAAATTTGCATT 134714 || || ||||| | ||||||| Sbjct 50387 GTCTTTACGAATACTTGCATT 50367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505390566324800