Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterorhabditis_20bacteriophora_20[genbank_20GCA_5F000223415.1_20201 1-08-22] 1,240 sequences; 76,974,349 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1221 123 3e-23 >seq1221 Length=1649993 Score = 123 bits (136), Expect = 3e-23 Identities = 162/222 (73%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 68980 TCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTA 69039 ||||| ||||||||| ||| || || ||| ||||||||||||| || ||||| |||| Sbjct 883452 TCAGCCAGTTCACAAGATGCTTCCAAGGCAGCGTAATAAATTGTCTCAAAAATTCGCTTA 883511 Query 69040 TTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCC 69099 || ||||| | ||||| || || || || | | ||| ||||||||||| ||| Sbjct 883512 TTTAGATCACGAGCTTCAGGAGATGTAAACGGGTATCGCATAAGCATAAATGCATCCGCC 883571 Query 69100 AATCCCTGAAC-CCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGG 69158 || |||||||| |||||| || ||||| || || | ||||||||| |||||| Sbjct 883572 AACCCCTGAACACCCAAT-CCAATAGGCCTGTGACGAGTATTTGAACGACGTGCTTCTTC 883630 Query 69159 AATAGGATAATAATTAATATCTATAATTTTATTAAGATTTCG 69200 || || || || || ||||| || ||||| || ||||| || Sbjct 883631 AACTGGGTAGTAGTTGATATCAATTATTTTGTTTAGATTACG 883672 Score = 123 bits (136), Expect = 3e-23 Identities = 162/222 (73%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 68980 TCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTA 69039 ||||| ||||||||| ||| || || ||| ||||||||||||| || ||||| |||| Sbjct 889291 TCAGCCAGTTCACAAGATGCTTCCAAGGCAGCGTAATAAATTGTCTCAAAAATTCGCTTA 889232 Query 69040 TTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCC 69099 || ||||| | ||||| || || || || | | ||| ||||||||||| ||| Sbjct 889231 TTTAGATCACGAGCTTCAGGAGATGTAAACGGGTATCGCATAAGCATAAATGCATCCGCC 889172 Query 69100 AATCCCTGAAC-CCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGG 69158 || |||||||| |||||| || ||||| || || | ||||||||| |||||| Sbjct 889171 AACCCCTGAACACCCAAT-CCAATAGGCCTGTGACGAGTATTTGAACGACGTGCTTCTTC 889113 Query 69159 AATAGGATAATAATTAATATCTATAATTTTATTAAGATTTCG 69200 || || || || || ||||| || ||||| || ||||| || Sbjct 889112 AACTGGGTAGTAGTTGATATCAATTATTTTGTTTAGATTACG 889071 Score = 96.9 bits (106), Expect = 5e-15 Identities = 113/152 (74%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 69689 ACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTAT 69748 |||| | |||||||| |||||| || || || || || || | | | || |||||||||| Sbjct 884615 ACTCGAAAATATCAGCATGCCAAGGCTCGAGGTAAATAGCGAAGGCACCTGGTCGTTTAT 884674 Query 69749 TTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATAC 69808 |||| || ||||||| || | || || |||||||| || | ||||| || || | || Sbjct 884675 TTCCACCTTGATCTACATAGCGAGCGGTATTATTATATACACGTAGCATTGGTATTAAAC 884734 Query 69809 CATTAGATTTACCATTTGTTCCAGAAATATAA 69840 |||| || ||||||| || | |||||| || Sbjct 884735 CATTTGAAGTACCATTAGT--CTGAAATAAAA 884764 Score = 96.9 bits (106), Expect = 5e-15 Identities = 113/152 (74%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 69689 ACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTAT 69748 |||| | |||||||| |||||| || || || || || || | | | || |||||||||| Sbjct 888128 ACTCGAAAATATCAGCATGCCAAGGCTCGAGGTAAATAGCGAAGGCACCTGGTCGTTTAT 888069 Query 69749 TTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATAC 69808 |||| || ||||||| || | || || |||||||| || | ||||| || || | || Sbjct 888068 TTCCACCTTGATCTACATAGCGAGCGGTATTATTATATACACGTAGCATTGGTATTAAAC 888009 Query 69809 CATTAGATTTACCATTTGTTCCAGAAATATAA 69840 |||| || ||||||| || | |||||| || Sbjct 888008 CATTTGAAGTACCATTAGT--CTGAAATAAAA 887979 Score = 95.1 bits (104), Expect = 2e-14 Identities = 132/184 (72%), Gaps = 1/184 (1%) Strand=Plus/Plus Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576 ||||||| ||||||||| || || | |||||||||||| ||||||||| | || Sbjct 884236 TCGAATTTCTCTCCCCAACAGTCTTCTAGTCCAGGACATTCGCGTGGACACATGAGACAC 884295 Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAG 69636 || | | ||| || ||||| ||||||||| |||||||||||||| | || ||| Sbjct 884296 CAATCTTGGTCACGCTCAACTCTTTTCATAAAGAGATCGGGAATCCACAAGGCATAAAAT 884355 Query 69637 AGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATA 69696 ||||| | | | | |||||| || |||||||| || ||| | | |||| | ||| Sbjct 884356 AGATCACGAGCACGTTCTTCTTCCGGACCAGTATTTTTCTTGAGAGCAACAAAC-CTATA 884414 Query 69697 ATAT 69700 |||| Sbjct 884415 ATAT 884418 Score = 95.1 bits (104), Expect = 2e-14 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 70351 GTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGT 70410 |||| ||| || | ||||| | |||||||| || || || |||||||| || ||||| Sbjct 885693 GTTTTCTTATGAAGGTTTGAAACCGCTATTCTAGCAGCAAGTATAGCATAATCTGGATGC 885752 Query 70411 TGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACT 70470 || || || | ||||||| |||| ||||| || | || | ||||| ||||| |||| Sbjct 885753 TGAGTGGTCATTGAAGCTGCTGTTTCTGCAGCCAAATTGTCCAGTTCTACAGTTGAAACT 885812 Query 70471 CCGTTATATAGCCCTTGAATAACTTTC 70497 || || || || || ||||||||||| Sbjct 885813 CCTTTGTACAGTCCACGAATAACTTTC 885839 Score = 95.1 bits (104), Expect = 2e-14 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 70351 GTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGT 70410 |||| ||| || | ||||| | |||||||| || || || |||||||| || ||||| Sbjct 887050 GTTTTCTTATGAAGGTTTGAAACCGCTATTCTAGCAGCAAGTATAGCATAATCTGGATGC 886991 Query 70411 TGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACT 70470 || || || | ||||||| |||| ||||| || | || | ||||| ||||| |||| Sbjct 886990 TGAGTGGTCATTGAAGCTGCTGTTTCTGCAGCCAAATTGTCCAGTTCTACAGTTGAAACT 886931 Query 70471 CCGTTATATAGCCCTTGAATAACTTTC 70497 || || || || || ||||||||||| Sbjct 886930 CCTTTGTACAGTCCACGAATAACTTTC 886904 Score = 95.1 bits (104), Expect = 2e-14 Identities = 132/184 (72%), Gaps = 1/184 (1%) Strand=Plus/Minus Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576 ||||||| ||||||||| || || | |||||||||||| ||||||||| | || Sbjct 888507 TCGAATTTCTCTCCCCAACAGTCTTCTAGTCCAGGACATTCGCGTGGACACATGAGACAC 888448 Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAG 69636 || | | ||| || ||||| ||||||||| |||||||||||||| | || ||| Sbjct 888447 CAATCTTGGTCACGCTCAACTCTTTTCATAAAGAGATCGGGAATCCACAAGGCATAAAAT 888388 Query 69637 AGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATA 69696 ||||| | | | | |||||| || |||||||| || ||| | | |||| | ||| Sbjct 888387 AGATCACGAGCACGTTCTTCTTCCGGACCAGTATTTTTCTTGAGAGCAACAAAC-CTATA 888329 Query 69697 ATAT 69700 |||| Sbjct 888328 ATAT 888325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686898152913600