Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterorhabditis_20bacteriophora_20[genbank_20GCA_5F000223415.1_20201 1-08-22] 1,240 sequences; 76,974,349 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq823 125 8e-24 seq971 118 1e-21 seq1149 113 5e-20 >seq823 Length=9300 Score = 125 bits (138), Expect = 8e-24 Identities = 114/144 (79%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || |||||||| |||||||| || || |||||||||||||| | Sbjct 8333 ATGCAAATCTTCGTAAAGACGCTCACCGGCAAAACGATCACTCTTGAGGTTGAAGCCTCC 8274 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | || || || || ||||| ||||||||||| || || || ||| Sbjct 8273 GACACTATTGAGAATGTAAAAGCGAAGATCCAGGATAAGGAGGGAATCCCACCTGATCAG 8214 Query 27526 CAGCGTCTAATTTTTGCTGGTAAG 27549 |||||||| |||||||||||| || Sbjct 8213 CAGCGTCTGATTTTTGCTGGTTAG 8190 Score = 125 bits (138), Expect = 8e-24 Identities = 114/144 (79%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || |||||||| |||||||| || || |||||||||||||| | Sbjct 8647 ATGCAAATCTTCGTAAAGACGCTCACCGGCAAAACGATCACTCTTGAGGTTGAAGCCTCC 8588 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | || || || || ||||| ||||||||||| || || || ||| Sbjct 8587 GACACTATTGAGAATGTAAAAGCGAAGATCCAGGATAAGGAGGGAATCCCACCTGATCAG 8528 Query 27526 CAGCGTCTAATTTTTGCTGGTAAG 27549 |||||||| |||||||||||| || Sbjct 8527 CAGCGTCTGATTTTTGCTGGTTAG 8504 Score = 125 bits (138), Expect = 8e-24 Identities = 114/144 (79%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || |||||||| |||||||| || || |||||||||||||| | Sbjct 8960 ATGCAAATCTTCGTAAAGACGCTCACCGGCAAAACGATCACTCTTGAGGTTGAAGCCTCC 8901 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | || || || || ||||| ||||||||||| || || || ||| Sbjct 8900 GACACTATTGAGAATGTAAAAGCGAAGATCCAGGATAAGGAGGGAATCCCACCTGATCAG 8841 Query 27526 CAGCGTCTAATTTTTGCTGGTAAG 27549 |||||||| |||||||||||| || Sbjct 8840 CAGCGTCTGATTTTTGCTGGTTAG 8817 Score = 125 bits (138), Expect = 8e-24 Identities = 114/144 (79%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || |||||||| |||||||| || || |||||||||||||| | Sbjct 9274 ATGCAAATCTTCGTAAAGACGCTCACCGGCAAAACGATCACTCTTGAGGTTGAAGCCTCC 9215 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | || || || || ||||| ||||||||||| || || || ||| Sbjct 9214 GACACTATTGAGAATGTAAAAGCGAAGATCCAGGATAAGGAGGGAATCCCACCTGATCAG 9155 Query 27526 CAGCGTCTAATTTTTGCTGGTAAG 27549 |||||||| |||||||||||| || Sbjct 9154 CAGCGTCTGATTTTTGCTGGTTAG 9131 >seq971 Length=50814 Score = 118 bits (130), Expect = 1e-21 Identities = 113/145 (78%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||| | || || |||||||| |||||||| || || |||||||||||||| | Sbjct 50367 AATGCAAGTATTCGTAAAGACGCTCACCGGCAAAACGATCACTCTTGAGGTTGAAGCCTC 50426 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | |||| ||| | || || || || ||||| ||||||||||| || || || || Sbjct 50427 CGACACTATTGAGAATGTAAAAGCGAAGATCCAGGATAAGGAGGGAATCCCACCTGATCA 50486 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAG 27549 ||||||||| |||||||||||| || Sbjct 50487 GCAGCGTCTGATTTTTGCTGGTTAG 50511 >seq1149 Length=232818 Score = 113 bits (124), Expect = 5e-20 Identities = 112/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| ||||| || || || ||||||||||| |||||||| ||| | | Sbjct 43349 ATGCAAATTTTTGTGAAGACTCTCACTGGTAAGACTATTACCCTTGAGGTAGAGCCCATT 43408 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | |||| | || ||||| || || || || || || |||||||| || || Sbjct 43409 GATACTATCGAAAATGTTAAAGCTAAGATCCAAGATAAAGAAGGCATTCCTCCTGATCAA 43468 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGC 27550 |||||||| || ||||| |||| || Sbjct 43469 CAGCGTCTGATCTTTGCAGGTATGC 43493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570301560188800