Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterorhabditis_20bacteriophora_20[genbank_20GCA_5F000223415.1_20201 1-08-22] 1,240 sequences; 76,974,349 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq870 105 6e-18 seq1149 84.2 2e-11 >seq870 Length=43228 Score = 105 bits (116), Expect = 6e-18 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||||||||| |||||||| || || || ||| | || |||||||||||||| | || Sbjct 18240 ATGCAGATATTCGTAAAAACCCTTACTGGGAAGACGATCACTCTTGAAGTGGAGGCTTCT 18181 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || |||| || ||| || ||||||||||||||||| || || || |||||| Sbjct 18180 GATACAATCGAGAACGTAAAAGCTAAGATTCAAGACAAAGAAGGAATTCCGCCTGATCAA 18121 Query 27108 CAGCGTTTAATATACGCCGGCAA 27130 || ||| | || | ||| || || Sbjct 18120 CAACGTCTCATTTTCGCTGGTAA 18098 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| ||||| |||||||| || || || || | || |||||||||||||| | || Sbjct 18594 ATGCAAATATTCGTAAAAACCCTTACTGGTAAAACGATCACTCTTGAAGTGGAGGCTTCT 18535 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || ||| || ||||||||||||||||| || || || |||||| Sbjct 18534 GATACAATCGATAATGTAAAAGCTAAGATTCAAGACAAAGAAGGAATTCCGCCTGATCAA 18475 Query 27108 CAGCGTTTAATATACGCCGG 27127 || ||| | || | ||| || Sbjct 18474 CAACGTCTCATTTTCGCTGG 18455 >seq1149 Length=232818 Score = 84.2 bits (92), Expect = 2e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 26965 ATAAATTTTTTAATTTATACGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTA 27024 || ||||||| | || | | |||||| || ||||| || ||||| || || ||| ||| Sbjct 43326 ATTAATTTTTGACGTTTTTAGTCATGCAAATTTTTGTGAAGACTCTCACTGGTAAGACTA 43385 Query 27025 TTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACA 27084 |||| ||||| || || || || | || || | || ||| || || ||||| | Sbjct 43386 TTACCCTTGAGGTAGAGCCCATTGATACTATCGAAAATGTTAAAGCTAAGATCCAAGATA 43445 Query 27085 AAGAAGGCATACCACCCGATCAACAGCGT 27113 |||||||||| || || |||||||||||| Sbjct 43446 AAGAAGGCATTCCTCCTGATCAACAGCGT 43474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434911658764800